(Q34569626)

3 August 2017

title

Rapid evolution through gene duplication and subfunctionalization of the testes-specific alpha4 proteasome subunits in Drosophila (English)

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3 August 2017

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Dara G Torgerson

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3 August 2017

Rama S Singh

series ordinal

2

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3 August 2017

language of work or name

English

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publication date

1 November 2004

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3 August 2017

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3 August 2017

volume

168

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3 August 2017

issue

3

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3 August 2017

page(s)

1421-1432

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The early stages of duplicate gene evolution.

3 August 2017

cites work

1 reference

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Adaptive evolution in the Arabidopsis MADS-box gene family inferred from its complete resolved phylogeny

7 July 2018

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Convergent neofunctionalization by positive Darwinian selection after ancient recurrent duplications of the xanthine dehydrogenase gene

7 July 2018

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Rapid sequence divergence in mammalian beta-defensins by adaptive evolution

7 July 2018

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Different evolutionary patterns between young duplicate genes in the human genome

7 July 2018

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Rapid evolution of male-biased gene expression in Drosophila

7 July 2018

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Dntf-2r, a young Drosophila retroposed gene with specific male expression under positive Darwinian selection.

7 July 2018

1 reference

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Positive selection in the egg receptor for abalone sperm lysin

7 July 2018

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Codon-substitution models for detecting molecular adaptation at individual sites along specific lineages

7 July 2018

1 reference

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Adaptive evolution of a duplicated pancreatic ribonuclease gene in a leaf-eating monkey

7 July 2018

1 reference

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The ubiquitin-proteasome proteolytic pathway: destruction for the sake of construction

7 July 2018

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Selection in the evolution of gene duplications

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

The rapid evolution of reproductive proteins

7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

MEGA2: molecular evolutionary genetics analysis software

7 July 2018

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Analysing gene function after duplication

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Positive selection of a gene family during the emergence of humans and African apes

7 July 2018

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7 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Rapid evolution of a sexual reproduction gene in centric diatoms of the genus Thalassiosira

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Functional divergence in the caspase gene family and altered functional constraints: statistical analysis and prediction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Evolutionary EST analysis identifies rapidly evolving male reproductive proteins in Drosophila

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Gene discovery using computational and microarray analysis of transcription in the Drosophila melanogaster testis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Sex gene pool evolution and speciation: a new paradigm

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Estimating synonymous and nonsynonymous substitution rates under realistic evolutionary models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Rapid evolution of male reproductive genes in the descent of man.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

The probability of duplicate gene preservation by subfunctionalization

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

On the possibility of constructive neutral evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Preservation of duplicate genes by complementary, degenerative mutations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

DnaSP version 3: an integrated program for molecular population genetics and molecular evolution analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Evolutionary conservation of a testes-specific proteasome subunit gene in Drosophila

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Positive Darwinian selection after gene duplication in primate ribonuclease genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

PAML: a program package for phylogenetic analysis by maximum likelihood

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Rapid evolution of sex-related genes in Chlamydomonas

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

TreeView: an application to display phylogenetic trees on personal computers

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Duplicated proteasome subunit genes in Drosophila melanogaster encoding testes-specific isoforms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

A codon-based model of nucleotide substitution for protein-coding DNA sequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Further examples of evolution by gene duplication revealed through DNA sequence comparisons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Extraordinary divergence and positive Darwinian selection in a fusagenic protein coating the acrosomal process of abalone spermatozoa

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

High level of divergence of male-reproductive-tract proteins, between Drosophila melanogaster and its sibling species, D. simulans.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Positive selection and subfunctionalization of duplicated CCT chaperonin subunits

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Rate of protein evolution versus fitness effect of gene deletion

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Expression of proteasome subunit isoforms during spermatogenesis in Drosophila melanogaster

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

The ghost of selection past: rates of evolution and functional divergence of anciently duplicated genes.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Positive selection driving the evolution of a gene of male reproduction, Acp26Aa, of Drosophila: II. Divergence versus polymorphism

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Positive selection and the molecular evolution of a gene of male reproduction, Acp26Aa of Drosophila

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

High divergence of reproductive tract proteins and their association with postzygotic reproductive isolation in Drosophila melanogaster and Drosophila virilis group species.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

The evolution of functionally novel proteins after gene duplication.

27 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1448786

Statistical methods for testing functional divergence after gene duplication

27 October 2018

1 reference

12 December 2020

Mammalian sperm proteins are rapidly evolving: evidence of positive selection in functionally diverse genes

1 reference

12 December 2020

Adaptive evolution in the photosensory domain of phytochrome A in early angiosperms

1 reference

12 December 2020

1 reference

12 December 2020

Frequent false detection of positive selection by the likelihood method with branch-site models

1 reference

12 December 2020

Determinants of substitution rates in mammalian genes: expression pattern affects selection intensity but not mutation rate

1 reference

12 December 2020

Positive selection and propeptide repeats promote rapid interspecific divergence of a gastropod sperm protein

1 reference

12 December 2020

Phylogenomic analysis of the alpha proteasome gene family from early-diverging eukaryotes

1 reference

12 December 2020

10.1534/GENETICS.104.027631

Identifiers

DOI

1 reference

3 August 2017

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3 August 2017

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