(Q34605583)

3 August 2017

title

Age-dependent gain of alternative splice forms and biased duplication explain the relation between splicing and duplication (English)

1 reference

3 August 2017

1 reference

Marc Robinson-Rechavi

series ordinal

2

1 reference

3 August 2017

Julien Roux

1

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3 August 2017

publication date

20 December 2010

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3 August 2017

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3 August 2017

volume

21

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3 August 2017

issue

3

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3 August 2017

page(s)

357-363

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Constraints and plasticity in genome and molecular-phenome evolution

3 August 2017

cites work

1 reference

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Alternative splicing and evolution: diversification, exon definition and function

7 July 2018

1 reference

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Distinct patterns of expression and evolution of intronless and intron-containing mammalian genes

7 July 2018

1 reference

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The evolution of gene duplications: classifying and distinguishing between models

7 July 2018

1 reference

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H-DBAS: human-transcriptome database for alternative splicing: update 2010

7 July 2018

1 reference

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The UCSC Genome Browser database: update 2010

7 July 2018

1 reference

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The Universal Protein Resource (UniProt) in 2010

7 July 2018

1 reference

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How confident can we be that orthologs are similar, but paralogs differ?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages

7 July 2018

1 reference

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BioMart--biological queries made easy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

EnsemblCompara GeneTrees: Complete, duplication-aware phylogenetic trees in vertebrates

7 July 2018

1 reference

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Alternative isoform regulation in human tissue transcriptomes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The evolutionary relationship between gene duplication and alternative splicing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The amphioxus genome and the evolution of the chordate karyotype

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The "alternative" choice of constitutive exons throughout evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Comparative genomics and evolution of alternative splicing: the pessimists' science.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

On homology searches by protein Blast and the characterization of the age of genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The (in)dependence of alternative splicing and gene duplication

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Different levels of alternative splicing among eukaryotes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

TimeTree: a public knowledge-base of divergence times among organisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Origin and evolution of new exons in rodents

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Identification and analysis of alternative splicing events conserved in human and mouse

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Evolution of the protein repertoire

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Alternative splicing and genome complexity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Alternative splicing: increasing diversity in the proteomic world

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The evolutionary fate and consequences of duplicate genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

PAML: a program package for phylogenetic analysis by maximum likelihood

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Evolution of alternative splicing after gene duplication

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

The "inverse relationship between evolutionary rate and age of mammalian genes" is an artifact of increased genetic distance with rate of evolution and time of divergence

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Widespread Evolutionary Conservation of Alternatively Spliced Exons in Caenorhabditis

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Not Born Equal: Increased Rate Asymmetry in Relocated and Retrotransposed Rodent Gene Duplicates

9 December 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3044850

Inverse relationship between evolutionary rate and age of mammalian genes

9 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21173032

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Alternative splicing and gene duplication are inversely correlated evolutionary mechanisms

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21173032

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.113803.110

1 reference

3 August 2017

1 reference

3 August 2017

1 reference