(Q30360130)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

title

The (in)dependence of alternative splicing and gene duplication (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

1 reference

alternative mRNA splicing, via spliceosome

1 reference

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

David Talavera

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

Xavier De la Cruz

series ordinal

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

2

Christine Vogel

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

3

Modesto Orozco

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

publication date

1 March 2007

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

PLOS Computational Biology

26 December 2019

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

volume

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

page(s)

e33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

26 December 2019

copyright license

start time

2 March 2007

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms

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Structural genomics analysis of alternative splicing and application to isoform structure modeling

3 June 2018

1 reference

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Alternative splicing and protein function

3 June 2018

1 reference

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Structural and functional diversity generated by alternative mRNA splicing.

3 June 2018

1 reference

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Interpreting expression profiles of cancers by genome-wide survey of breadth of expression in normal tissues

3 June 2018

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Bioinformatics analysis of alternative splicing

3 June 2018

1 reference

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Transcription control reprogramming in genetic backup circuits

3 June 2018

1 reference

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Revealing global regulatory features of mammalian alternative splicing using a quantitative microarray platform

3 June 2018

1 reference

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NCBI GEO: mining millions of expression profiles--database and tools

3 June 2018

1 reference

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Inparanoid: a comprehensive database of eukaryotic orthologs

3 June 2018

1 reference

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Genome SEGE: a database for 'intronless' genes in eukaryotic genomes

3 June 2018

1 reference

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Diversity of vertebrate splicing factor U2AF35: identification of alternatively spliced U2AF1 mRNAS.

3 June 2018

1 reference

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A gene atlas of the mouse and human protein-encoding transcriptomes

3 June 2018

1 reference

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Transcriptome and genome conservation of alternative splicing events in humans and mice.

3 June 2018

1 reference

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An unappreciated role for RNA surveillance

3 June 2018

1 reference

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A conformational switch in the Piccolo C2A domain regulated by alternative splicing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

3 June 2018

1 reference

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The Gene Ontology (GO) database and informatics resource

3 June 2018

1 reference

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The SUPERFAMILY database in 2004: additions and improvements

3 June 2018

1 reference

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ASD: the Alternative Splicing Database.

3 June 2018

1 reference

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The relevance of alternative RNA splicing to pharmacogenomics

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Dosage sensitivity and the evolution of gene families in yeast

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Divergence in the spatial pattern of gene expression between human duplicate genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Evolution of the protein repertoire

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

DAVID: Database for Annotation, Visualization, and Integrated Discovery

3 June 2018

1 reference

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Increase of functional diversity by alternative splicing

3 June 2018

1 reference

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ASAP: the Alternative Splicing Annotation Project

3 June 2018

1 reference

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Evidence for the widespread coupling of alternative splicing and nonsense-mediated mRNA decay in humans

3 June 2018

1 reference

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Alternative pre-mRNA splicing and proteome expansion in metazoans

3 June 2018

1 reference

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Subfunctionalization of duplicate mitf genes associated with differential degeneration of alternative exons in fish

3 June 2018

1 reference

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An extensive network of coupling among gene expression machines

3 June 2018

1 reference

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The evolution of gene duplicates

3 June 2018

1 reference

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Selection in the evolution of gene duplications

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Characterization of disease-associated single amino acid polymorphisms in terms of sequence and structure properties.

3 June 2018

1 reference

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The Pfam protein families database

3 June 2018

1 reference

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Alternative splicing and genome complexity

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Duplicate mitf genes in zebrafish: complementary expression and conservation of melanogenic potential

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Clustering of highly homologous sequences to reduce the size of large protein databases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Alternative splicing: increasing diversity in the proteomic world

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

The evolutionary fate and consequences of duplicate genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

The impact of comparative genomics on our understanding of evolution

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Gene ontology: tool for the unification of biology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

EID: the Exon-Intron Database-an exhaustive database of protein-coding intron-containing genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Yeast genome evolution in the post-genome era.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Characterization of single-nucleotide polymorphisms in coding regions of human genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Crystal structure of JNK3: a kinase implicated in neuronal apoptosis

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Prediction of the stability of protein mutants based on structural environment-dependent amino acid substitution and propensity tables

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Analysis of compositionally biased regions in sequence databases

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Developmental role of transcription factor isoforms generated by alternative splicing

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Comparative protein modelling by satisfaction of spatial restraints

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

A relationship between protein stability and protein function

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

The emerging role of insertions and deletions in protein engineering

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

A general method applicable to the search for similarities in the amino acid sequence of two proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

The relation between the divergence of sequence and structure in proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Additivity of mutational effects in proteins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Amino acid substitution matrices from protein blocks

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Evolution of alternative splicing after gene duplication

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Why are both ends of the polypeptide chain on the outside of proteins?

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Splice variants: a homology modeling approach

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Growth and specification of the eye are controlled independently by Eyegone and Eyeless in Drosophila melanogaster

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Alternative splicing mechanisms for the modulation of protein function: conservation between human and other species.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

How Well is Enzyme Function Conserved as a Function of Pairwise Sequence Identity?

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Alternative splicing of lola generates 19 transcription factors controlling axon guidance in Drosophila.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Theoretical analysis of alternative splice forms using computational methods.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Origin of alternative splicing by tandem exon duplication.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

An alternative-exon database and its statistical analysis.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Quantitative variation and selection of esterase gene amplification in Culex pipiens.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Empirical and structural models for insertions and deletions in the divergent evolution of proteins.

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1808492

Alternative splicing and gene duplication are inversely correlated evolutionary mechanisms

26 November 2018

1 reference

12 December 2020

Evolutionary Origin and Maintenance of Coexpressed Gene Clusters in Mammals

1 reference

12 December 2020

Amino acid side chain parameters for correlation studies in biology and pharmacology

1 reference

12 December 2020

Analysis of insertions/deletions in protein structures

1 reference

12 December 2020

10.1371/JOURNAL.PCBI.0030033

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/TalaveraVOTC07

26 December 2019

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:17335345%20AND%20SRC:MED&resulttype=core&format=json

26 December 2019

1 reference