(Q34622109)

3 August 2017

title

Comparative genomics of parasitic silkworm microsporidia reveal an association between genome expansion and host adaptation (English)

1 reference

3 August 2017

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30

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3 August 2017

Qingyou Xia

4

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Guojie Zhang

object named as

Guojie Zhang

6

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Jun Wang

object named as

Jun Wang

31

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author name string

Guoqing Pan

1

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3 August 2017

Jinshan Xu

2

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3 August 2017

Tian Li

3

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3 August 2017

Shao-Lun Liu

5

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3 August 2017

Songgang Li

7

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3 August 2017

Chunfeng Li

8

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3 August 2017

Handeng Liu

9

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3 August 2017

Liu Yang

10

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3 August 2017

Tie Liu

11

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3 August 2017

Xi Zhang

12

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3 August 2017

Zhengli Wu

13

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3 August 2017

Wei Fan

14

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3 August 2017

Xiaoqun Dang

15

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3 August 2017

Heng Xiang

16

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3 August 2017

Meilin Tao

17

1 reference

3 August 2017

Yanhong Li

18

1 reference

3 August 2017

Junhua Hu

19

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3 August 2017

Zhi Li

20

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3 August 2017

Lipeng Lin

21

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3 August 2017

Jie Luo

22

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3 August 2017

Lina Geng

23

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3 August 2017

LinLing Wang

24

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3 August 2017

Mengxian Long

25

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3 August 2017

Yongji Wan

26

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3 August 2017

Ningjia He

27

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3 August 2017

Ze Zhang

28

1 reference

3 August 2017

Cheng Lu

29

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3 August 2017

Zhonghuai Xiang

32

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3 August 2017

Zeyang Zhou

33

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3 August 2017

language of work or name

English

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publication date

16 March 2013

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3 August 2017

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3 August 2017

volume

14

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3 August 2017

page(s)

186

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Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites

3 August 2017

cites work

1 reference

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Acquisition of an animal gene by microsporidian intracellular parasites

7 July 2018

1 reference

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The intriguing nature of microsporidian genomes.

7 July 2018

1 reference

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Gene transfer: anything goes in plant mitochondria

7 July 2018

1 reference

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The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis

7 July 2018

1 reference

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The reduced genome of the parasitic microsporidian Enterocytozoon bieneusi lacks genes for core carbon metabolism

7 July 2018

1 reference

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De novo assembly of human genomes with massively parallel short read sequencing

7 July 2018

1 reference

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A genome-wide survey for host response of silkworm, Bombyx mori during pathogen Bacillus bombyseptieus infection

7 July 2018

1 reference

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Draft genome sequence of the Daphnia pathogen Octosporea bayeri: insights into the gene content of a large microsporidian genome and a model for host-parasite interactions

7 July 2018

1 reference

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Circos: an information aesthetic for comparative genomics

7 July 2018

1 reference

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Genomic analyses of the microsporidian Nosema ceranae, an emergent pathogen of honey bees

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Genomic survey of the non-cultivatable opportunistic human pathogen, Enterocytozoon bieneusi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Horizontal gene transfer in eukaryotic evolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Duplicated paralogous genes subject to positive selection in the genome of Trypanosoma brucei

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

A novel route for ATP acquisition by the remnant mitochondria of Encephalitozoon cuniculi.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Genome sequence surveys of Brachiola algerae and Edhazardia aedis reveal microsporidia with low gene densities.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Patterns of genome evolution among the microsporidian parasites Encephalitozoon cuniculi, Antonospora locustae and Enterocytozoon bieneusi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

PAML 4: phylogenetic analysis by maximum likelihood

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Stripped-down DNA repair in a highly reduced parasite

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

DarkHorse: a method for genome-wide prediction of horizontal gene transfer

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

The varying microsporidian genome: existence of long-terminal repeat retrotransposon in domesticated silkworm parasite Nosema bombycis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Gene identification in novel eukaryotic genomes by self-training algorithm

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Serpins, the vasculature, and viral therapeutics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Accuracy and power of statistical methods for detecting adaptive evolution in protein coding sequences and for identifying positively selected sites

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

MUSCLE: a multiple sequence alignment method with reduced time and space complexity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Bacterial catalase in the microsporidian Nosema locustae: implications for microsporidian metabolism and genome evolution.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Poxvirus immune modulators: functional insights from animal models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Microsporidia: Biology and Evolution of Highly Reduced Intracellular Parasites

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Plant transposable elements: where genetics meets genomics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Genome sequence and gene compaction of the eukaryote parasite Encephalitozoon cuniculi

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Improved microbial gene identification with GLIMMER

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Likelihood models for detecting positively selected amino acid sites and applications to the HIV-1 envelope gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Genes coding for reverse transcriptase, DNA-directed RNA polymerase, and chitin synthase from the microsporidian Spraguea lophii

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Identification of a chromosome harboring the small subunit ribosomal RNA gene of Nosema bombycis

7 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-186

The nuclear apparatus and chromosomal DNA of the microsporidian Nosema antheraeae

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-186

Identification of NbME MITE families: potential molecular markers in the microsporidia Nosema bombycis

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-186

Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-186

[Identification of a new serpin gene (NbSPN106) from Nosema bombycis].

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

[Range of the hosts of the causative agent of pébrine (Nosema bombycis) in the mulberry silkworm]

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3614468

Genome Compaction and Stability in Microsporidian Intracellular Parasites

26 October 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-186

Occurrence of a new microsporidan: Enterocytozoon bieneusi n.g., n. sp., in the enterocytes of a human patient with AIDS

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23496955

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Horizontal Gene Transfer and the Evolution of Parasitic Protozoa

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23496955

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-14-186

1 reference

3 August 2017

1 reference

3 August 2017

1 reference