(Q34625297)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

title

Comparative RNA-seq analysis in the unsequenced axolotl: the oncogene burst highlights early gene expression in the blastema (English)

1 reference

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26 February 2020

0 references

1 reference

1 reference

14

1 reference

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26 February 2020

Elly Tanaka

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Christopher Barry

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

17

Colin N Dewey

1 reference

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26 February 2020

author name string

Ron Stewart

1

1 reference

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26 February 2020

Cynthia Alexander Rascón

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Shulan Tian

3

1 reference

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26 February 2020

Jeff Nie

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Li-Fang Chu

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Hamisha Ardalani

7

1 reference

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26 February 2020

Ryan J Wagner

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

Mitchell D Probasco

9

1 reference

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26 February 2020

Jennifer M Bolin

10

1 reference

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26 February 2020

Ning Leng

11

1 reference

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26 February 2020

Srikumar Sengupta

12

1 reference

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26 February 2020

Michael Volkmer

13

1 reference

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26 February 2020

James A Thomson

16

1 reference

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26 February 2020

publication date

7 March 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

PLOS Computational Biology

26 February 2020

published in

1 reference

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26 February 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

page(s)

e1002936

1 reference

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Creative Commons Attribution 4.0 International

26 February 2020

copyright license

start time

7 March 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

edgeR

object named as

EdgeR

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

MIRA

object named as

MIRA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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7 July 2018

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7 July 2018

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Sall1-dependent signals affect Wnt signaling and ureter tip fate to initiate kidney development

7 July 2018

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Transient inactivation of Rb and ARF yields regenerative cells from postmitotic mammalian muscle

7 July 2018

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Essential role of nuclear factor of activated T cells (NFAT)-mediated Wnt signaling in osteoblast differentiation induced by strontium ranelate

7 July 2018

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A novel SALL4/OCT4 transcriptional feedback network for pluripotency of embryonic stem cells

7 July 2018

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Jarid2 is a PRC2 component in embryonic stem cells required for multi-lineage differentiation and recruitment of PRC1 and RNA Polymerase II to developmental regulators.

7 July 2018

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The dual-specificity MAP kinase phosphatases: critical roles in development and cancer

7 July 2018

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The Hippo-YAP pathway in organ size control and tumorigenesis: an updated version

7 July 2018

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Regeneration review reprise

7 July 2018

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Expression profiles during dedifferentiation in newt lens regeneration revealed by expressed sequence tags

7 July 2018

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7 July 2018

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Analysis of newly established EST databases reveals similarities between heart regeneration in newt and fish

7 July 2018

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HMGB2 stabilizes p53 by interfering with E6/E6AP-mediated p53 degradation in human papillomavirus-positive HeLa cells

7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Chromobox protein homologue 7 protein, with decreased expression in human carcinomas, positively regulates E-cadherin expression by interacting with the histone deacetylase 2 protein

7 July 2018

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A targeted constitutive mutation in the APC tumor suppressor gene underlies mammary but not intestinal tumorigenesis

7 July 2018

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Cells keep a memory of their tissue origin during axolotl limb regeneration

7 July 2018

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Regeneration: The origin of cancer or a possible cure?

7 July 2018

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Expression of stem cell pluripotency factors during regeneration in newts.

7 July 2018

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7 July 2018

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 July 2018

1 reference

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Sall genes regulate region-specific morphogenesis in the mouse limb by modulating Hox activities

7 July 2018

1 reference

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Genic regions of a large salamander genome contain long introns and novel genes

7 July 2018

1 reference

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Microarray and cDNA sequence analysis of transcription during nerve-dependent limb regeneration

7 July 2018

1 reference

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7 July 2018

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Runx1 is required for the endothelial to haematopoietic cell transition but not thereafter

7 July 2018

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7 July 2018

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Hedgehog signaling promotes the degradation of tumor suppressor Sufu through the ubiquitin-proteasome pathway

7 July 2018

1 reference

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Stretching the limits: stem cells in regeneration science

7 July 2018

1 reference

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Hmga2 promotes neural stem cell self-renewal in young but not old mice by reducing p16Ink4a and p19Arf Expression

7 July 2018

1 reference

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7 July 2018

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Zic2 is expressed in pluripotent cells in the blastocyst and adult brain expression overlaps with makers of neurogenesis

7 July 2018

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Identification of genes associated with regenerative success of Xenopus laevis hindlimbs.

7 July 2018

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Polycomb complexes and epigenetic states

7 July 2018

1 reference

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Transforming growth factor: beta signaling is essential for limb regeneration in axolotls

7 July 2018

1 reference

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Sox17 and Sox4 differentially regulate beta-catenin/T-cell factor activity and proliferation of colon carcinoma cells

7 July 2018

1 reference

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Zfx controls the self-renewal of embryonic and hematopoietic stem cells.

7 July 2018

1 reference

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Inhibitory Gli3 activity negatively regulates Wnt/beta-catenin signaling

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Wnt/beta-catenin signaling regulates vertebrate limb regeneration

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

CancerGenes: a gene selection resource for cancer genome projects

7 July 2018

1 reference

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Sall4 modulates embryonic stem cell pluripotency and early embryonic development by the transcriptional regulation of Pou5f1

7 July 2018

1 reference

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SALL4 is directly activated by TCF/LEF in the canonical Wnt signaling pathway

7 July 2018

1 reference

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Cooperative and antagonistic interactions between Sall4 and Tbx5 pattern the mouse limb and heart

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Appendage regeneration in adult vertebrates and implications for regenerative medicine

7 July 2018

1 reference

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Blimp1 is a critical determinant of the germ cell lineage in mice

7 July 2018

1 reference

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Normal newt limb regeneration requires matrix metalloproteinase function

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

7 July 2018

1 reference

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Amphibian Regeneration and Stem Cells

7 July 2018

1 reference

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Regeneration of the urodele limb: a review

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Tbx5 is essential for forelimb bud initiation following patterning of the limb field in the mouse embryo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

The chromatin remodeling complex NoRC targets HDAC1 to the ribosomal gene promoter and represses RNA polymerase I transcription

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

CONSEL: for assessing the confidence of phylogenetic tree selection

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Pax7 is required for the specification of myogenic satellite cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Atlas of genetics and cytogenetics in oncology and haematology, an interactive database

7 July 2018

1 reference

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A Wnt5a pathway underlies outgrowth of multiple structures in the vertebrate embryo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

The CBFbeta subunit is essential for CBFalpha2 (AML1) function in vivo

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Tenascin-C and the development of articular cartilage

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Transcriptional activation domain of the muscle-specific gene-regulatory protein myf5.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Characterization of a newt tenascin cDNA and localization of tenascin mRNA during newt limb regeneration by in situ hybridization

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Different regulation of T-box genes Tbx4 and Tbx5 during limb development and limb regeneration.

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Pvclust: an R package for assessing the uncertainty in hierarchical clustering.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Prdm1 acts downstream of a sequential RA, Wnt and Fgf signaling cascade during zebrafish forelimb induction

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Tbx18 and boundary formation in chick somite and wing development.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Gli3 and Plzf cooperate in proximal limb patterning at early stages of limb development

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Skeletal muscle FOXO1 (FKHR) transgenic mice have less skeletal muscle mass, down-regulated Type I (slow twitch/red muscle) fiber genes, and impaired glycemic control

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Blimp1 regulates development of the posterior forelimb, caudal pharyngeal arches, heart and sensory vibrissae in mice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Expression of genes of type I and type II collagen in the formation and development of the blastema of regenerating newt limb

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Confidence Limits on Phylogenies: an Approach using the Bootstrap

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1002936

Identification of a prx1 limb enhancer.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3591270

Multiple roles of mesenchymal -catenin during murine limb patterning

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23505351

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Transient expression of simple epithelial keratins by mesenchymal cells of regenerating newt limb

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23505351

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PCBI.1002936

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

journals/ploscb/StewartRTNBCAWPBLSVHTTD13

26 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json

26 February 2020

PubMed publication ID

23505351

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:23505351%20AND%20SRC:MED&resulttype=core&format=json