(Q34627254)

3 August 2017

title

Plant domestication, a unique opportunity to identify the genetic basis of adaptation (English)

1 reference

3 August 2017

1 reference

3

Brandon S Gaut

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3 August 2017

Jeffrey Ross-Ibarra

1

1 reference

3 August 2017

Peter L Morrell

series ordinal

2

1 reference

3 August 2017

language of work or name

English

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publication date

9 May 2007

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Proceedings of the National Academy of Sciences of the United States of America

3 August 2017

published in

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3 August 2017

volume

104 Suppl 1

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3 August 2017

page(s)

8641-8648

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Genetic evidence for a second domestication of barley (Hordeum vulgare) east of the Fertile Crescent

3 August 2017

cites work

1 reference

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The Association of Size Differences with Seed-Coat Pattern and Pigmentation in PHASEOLUS VULGARIS.

7 July 2018

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The molecular genetics of crop domestication

7 July 2018

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Recombination: an underappreciated factor in the evolution of plant genomes

7 July 2018

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A NAC Gene regulating senescence improves grain protein, zinc, and iron content in wheat

7 July 2018

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Controlling the false-positive rate in multilocus genome scans for selection

7 July 2018

1 reference

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Phylogeography of Asian wild rice, Oryza rufipogon, reveals multiple independent domestications of cultivated rice, Oryza sativa

7 July 2018

1 reference

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The PHYTOCHROME C photoreceptor gene mediates natural variation in flowering and growth responses of Arabidopsis thaliana

7 July 2018

1 reference

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How reliable are empirical genomic scans for selective sweeps?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Estimating the contribution of mutation, recombination and gene conversion in the generation of haplotypic diversity

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

A nonparametric test reveals selection for rapid flowering in the Arabidopsis genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

A general population-genetic model for the production by population structure of spurious genotype-phenotype associations in discrete, admixed or spatially distributed populations.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Challenges of detecting directional selection after a bottleneck: lessons from Sorghum bicolor

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Selection under domestication: evidence for a sweep in the rice waxy genomic region

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Rice domestication by reducing shattering

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genetic association mapping and genome organization of maize

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

A map of recent positive selection in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Maize association population: a high-resolution platform for quantitative trait locus dissection

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Selective sweep mapping of genes with large phenotypic effects

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Approximate Bayesian inference reveals evidence for a recent, severe bottleneck in a Netherlands population of Drosophila melanogaster

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genome-wide association mapping in Arabidopsis identifies previously known flowering time and pathogen resistance genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Natural selection on protein-coding genes in the human genome

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Molecular characterization of the major wheat domestication gene Q.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The effect of polymorphisms in the enhancer of split gene complex on bristle number variation in a large wild-caught cohort of Drosophila melanogaster.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The origin of the naked grains of maize

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Association mapping of kernel size and milling quality in wheat (Triticum aestivum L.) cultivars

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Natural variation in Arabidopsis. How do we find the causal genes?

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Distinguishing between selective sweeps and demography using DNA polymorphism data

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Association analysis of candidate genes for maysin and chlorogenic acid accumulation in maize silks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Low levels of linkage disequilibrium in wild barley (Hordeum vulgare ssp. spontaneum) despite high rates of self-fertilization

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Molecular population genetics and the search for adaptive evolution in plants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Diversifying selection in plant breeding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The role of haplotypes in candidate gene studies

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

A potential regulatory polymorphism upstream of hairy is not associated with bristle number variation in wild-caught Drosophila

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Estimating the rate of gene conversion on human chromosome 21.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Intense and highly localized gene conversion activity in human meiotic crossover hot spots

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Structure of linkage disequilibrium in plants

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Distinct geographic patterns of genetic diversity are maintained in wild barley (Hordeum vulgare ssp. spontaneum) despite migration.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

SNP frequency, haplotype structure and linkage disequilibrium in elite maize inbred lines

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genetic diversity and selection in the maize starch pathway

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Comparative sequencing in the genus Lycopersicon. Implications for the evolution of fruit size in the domestication of cultivated tomatoes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genetic analysis of sunflower domestication.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genetics and geography of wild cereal domestication in the near east.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

A single domestication for maize shown by multilocus microsatellite genotyping

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The signature of positive selection at randomly chosen loci.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Generating samples under a Wright-Fisher neutral model of genetic variation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Mutations of barley beta-amylase that improve substrate-binding affinity and thermostability

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genetic and morphological analysis of a maize-teosinte F2 population: implications for the origin of maize

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Patterns of DNA sequence polymorphism along chromosome 1 of maize (Zea mays ssp. mays L.).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Heterogeneous geographic patterns of nucleotide sequence diversity between two alcohol dehydrogenase genes in wild barley (Hordeum vulgare subspecies spontaneum).

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Targeting induced local lesions IN genomes (TILLING) for plant functional genomics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The power of association studies to detect the contribution of candidate genetic loci to variation in complex traits

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Speciation and domestication in maize and its wild relatives: evidence from the globulin-1 gene

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Investigation of the bottleneck leading to the domestication of maize

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The future of genetic studies of complex human diseases

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

teosinte branched1 and the origin of maize: evidence for epistasis and the evolution of dominance

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Statistical method for testing the neutral mutation hypothesis by DNA polymorphism

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Genetic analysis of the morphological differences between maize and teosinte

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

The spandrels of San Marco and the Panglossian paradigm: a critique of the adaptationist programme

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1876441

Origin of extant domesticated sunflowers in eastern North America

7 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Site of Einkorn Wheat Domestication Identified by DNA Fingerprinting

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Darwin's experimental natural history.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Analogy and technology in Darwin's vision of nature.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

The Genetic Basis of Species Differences in Plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

fw2.2: a quantitative trait locus key to the evolution of tomato fruit size

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Genetic analysis of rice domestication syndrome with the wild annual species, Oryza nivara.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Epistasis: too often neglected in complex trait studies?

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

An SNP caused loss of seed shattering during rice domestication

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Caught red-handed: Rc encodes a basic helix-loop-helix protein conditioning red pericarp in rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Linkage disequilibrium and the mapping of complex human traits

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Dwarf8 polymorphisms associate with variation in flowering time

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

6. Domestication rates in wild-type wheats and barley under primitive cultivation

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Selection versus demography: a multilocus investigation of the domestication process in maize

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

The effects of artificial selection on the maize genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Molecular evolution of FLORICAULA/LEAFY orthologs in the Andropogoneae (Poaceae).

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

A large-scale screen for artificial selection in maize identifies candidate agronomic loci for domestication and crop improvement.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Multilocus analysis of nucleotide variation of Oryza sativa and its wild relatives: severe bottleneck during domestication of rice

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Evidence of the domestication history of flax (Linum usitatissimum L.) from genetic diversity of the sad2 locus

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Resolution of quantitative traits into Mendelian factors by using a complete linkage map of restriction fragment length polymorphisms

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0700643104

Comparison of the waxy locus sequence from a non-waxy strain and two waxy mutants of spontaneous and artificial origins in barley

21 January 2018

1 reference

12 December 2020

Diverse origins of waxy foxtail millet crops in East and Southeast Asia mediated by multiple transposable element insertions

1 reference

12 December 2020

The signature of positive selection on standing genetic variation

1 reference

12 December 2020

Population genetic structure of Japanese wild soybean (Glycine soja) based on microsatellite variation

1 reference

12 December 2020

Convergent domestication of cereal crops by independent mutations at corresponding genetic Loci

1 reference

12 December 2020

On the Origin of Species by Means of Natural Selection, or the Preservation of Favoured Races in the Struggle for Life

1 reference

12 December 2020

Genetic hitch-hiking in a subdivided population

1 reference

12 December 2020

Identifiers

DOI

10.1073/PNAS.0700643104

1 reference

3 August 2017

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1 reference

3 August 2017

1 reference