(Q34662038)

25171333

3 August 2017

title

Alternatives to vitamin B1 uptake revealed with discovery of riboswitches in multiple marine eukaryotic lineages (English)

1 reference

3 August 2017

0 references

1 reference

1

1 reference

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31 May 2020

Adam Monier

3

1 reference

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31 May 2020

Susanne Wilken

5

1 reference

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31 May 2020

Shuangchun Yan

6

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31 May 2020

Thomas Mock

7

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31 May 2020

11

Alexandra Z Worden

1 reference

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31 May 2020

4

Sebastian Sudek

1 reference

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31 May 2020

8

John M Archibald

1 reference

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31 May 2020

10

Adrian Reyes-Prieto

1 reference

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31 May 2020

author name string

Jian Guo

2

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31 May 2020

Tadhg P Begley

9

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31 May 2020

language of work or name

1 reference

29 August 2014

1 reference

25171333

3 August 2017

number of pages

13

1 reference

based on heuristic

inferred from page(s)

published in

The ISME Journal

1 reference

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31 May 2020

volume

8

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31 May 2020

issue

12

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31 May 2020

page(s)

2517-2529

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25171333%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 3.0 Unported

31 May 2020

copyright license

start time

29 August 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing

1 reference

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Discovery of a SAR11 growth requirement for thiamin's pyrimidine precursor and its distribution in the Sargasso Sea.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Pan genome of the phytoplankton Emiliania underpins its global distribution.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Eukaryotic TPP riboswitch regulation of alternative splicing involving long-distance base pairing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

7 July 2018

1 reference

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Influence of vitamin B auxotrophy on nitrogen metabolism in eukaryotic phytoplankton

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Multiple B-vitamin depletion in large areas of the coastal ocean

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Phytoplankton distribution patterns in the northwestern Sargasso Sea revealed by small subunit rRNA genes from plastids

7 July 2018

1 reference

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Prospects for riboswitch discovery and analysis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Most harmful algal bloom species are vitamin B1and B12auxotrophs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Broadly sampled multigene analyses yield a well-resolved eukaryotic tree of life

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

The endosymbiotic origin, diversification and fate of plastids

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Riboswitch-mediated control of gene expression in eukaryotes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Molecular phylogeny and classification of the Mamiellophyceae class. nov. (Chlorophyta) based on sequence comparisons of the nuclear- and plastid-encoded rRNA operons

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

The Pfam protein families database

7 July 2018

1 reference

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Identification of candidate structured RNAs in the marine organism 'Candidatus Pelagibacter ubique'

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Green Evolution and Dynamic Adaptations Revealed by Genomes of the Marine Picoeukaryotes Micromonas

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

The structural and biochemical foundations of thiamin biosynthesis

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Switching the light on plant riboswitches

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Thiamine biosynthesis in algae is regulated by riboswitches

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Riboswitch control of gene expression in plants by splicing and alternative 3' end processing of mRNAs

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Control of alternative RNA splicing and gene expression by eukaryotic riboswitches

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Algae need their vitamins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Recent progress in understanding thiamin biosynthesis and its genetic regulation in Saccharomyces cerevisiae

7 July 2018

1 reference

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Assessment of methods for amino acid matrix selection and their use on empirical data shows that ad hoc assumptions for choice of matrix are not justified

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Regulation of bacterial gene expression by riboswitches

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

MrBayes 3: Bayesian phylogenetic inference under mixed models

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Comparative genomics of thiamin biosynthesis in procaryotes. New genes and regulatory mechanisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

Principles governing amino acid composition of integral membrane proteins: application to topology prediction

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

The control mechanism of thiamine biosynthesis a model for the study of control of converging pathways

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4260697

INFLUENCE OF TEMPERATURE AND SOLAR RADIATION ON PERSISTENCE OF VITAMIN B12 , THIAMINE, AND BIOTIN IN SEAWATER(1).

7 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.146

Biochemical characterization of ThiT from Lactococcus lactis: a thiamin transporter with picomolar substrate binding affinity

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.146

Repression of essential chloroplast genes reveals new signaling pathways and regulatory feedback loops in chlamydomonas.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.146

Mechanistic studies on thiamin phosphate synthase: evidence for a dissociative mechanism

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.146

thiBPQ encodes an ABC transporter required for transport of thiamine and thiamine pyrophosphate in Salmonella typhimurium

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.146

Assessing the dynamics and ecology of marine picophytoplankton: The importance of the eukaryotic component

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.146

21 January 2018

Identifiers

DOI

10.1038/ISMEJ.2014.146

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25171333%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

31 May 2020

0 references

1 reference

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31 May 2020

25171333

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25171333%20AND%20SRC:MED&resulttype=core&format=json