(Q34697766)

4 August 2017

title

Distinct types of disorder in the human proteome: functional implications for alternative splicing (English)

1 reference

alternative mRNA splicing, via spliceosome

4 August 2017

main subject

1 reference

5

1 reference

4 August 2017

3

0 references

Benjamin J. Blencowe

8

object named as

Benjamin J Blencowe

1 reference

4 August 2017

Recep Colak

1

1 reference

4 August 2017

TaeHyung Kim

2

1 reference

4 August 2017

Mark Sun

4

1 reference

4 August 2017

Jeremy Bellay

6

1 reference

4 August 2017

Chad L Myers

7

1 reference

4 August 2017

Philip M Kim

9

1 reference

4 August 2017

publication date

25 April 2013

1 reference

PLOS Computational Biology

4 August 2017

published in

1 reference

4 August 2017

volume

9

1 reference

4 August 2017

issue

4

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4 August 2017

page(s)

e1003030

1 reference

Creative Commons Attribution 4.0 International

4 August 2017

copyright license

start time

25 April 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

based on heuristic

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks

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7 July 2018

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An omics perspective of protein disorder

7 July 2018

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Functional consequences of developmentally regulated alternative splicing

7 July 2018

1 reference

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Integrative annotation of human large intergenic noncoding RNAs reveals global properties and specific subclasses

7 July 2018

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7 July 2018

1 reference

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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7 July 2018

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Global profiling and molecular characterization of alternative splicing events misregulated in lung cancer

7 July 2018

1 reference

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Verification of alternative splicing variants based on domain integrity, truncation length and intrinsic protein disorder

7 July 2018

1 reference

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Integrative modeling defines the Nova splicing-regulatory network and its combinatorial controls

7 July 2018

1 reference

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Deciphering the splicing code

7 July 2018

1 reference

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Parallelization of the MAFFT multiple sequence alignment program

7 July 2018

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RNA processing and its regulation: global insights into biological networks

7 July 2018

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7 July 2018

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Modularity of intrinsic disorder in the human proteome.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Unfoldomics of human diseases: linking protein intrinsic disorder with diseases

7 July 2018

1 reference

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Structural implication of splicing stochastics

7 July 2018

1 reference

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The consensus coding sequence (CCDS) project: Identifying a common protein-coding gene set for the human and mouse genomes

7 July 2018

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7 July 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 July 2018

1 reference

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7 July 2018

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Cancer driver mutations in protein kinase genes

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Tight regulation of unstructured proteins: from transcript synthesis to protein degradation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

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7 July 2018

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Alternative isoform regulation in human tissue transcriptomes

7 July 2018

1 reference

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7 July 2018

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Determination and validation of principal gene products.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Global analysis of alternative splicing differences between humans and chimpanzees

7 July 2018

1 reference

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Inferring function using patterns of native disorder in proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

The human disease network

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Quantitative microarray profiling provides evidence against widespread coupling of alternative splicing with nonsense-mediated mRNA decay to control gene expression

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Nova regulates brain-specific splicing to shape the synapse

7 July 2018

1 reference

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IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Intrinsically unstructured proteins and their functions

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

The COSMIC (Catalogue of Somatic Mutations in Cancer) database and website

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

The DISOPRED server for the prediction of protein disorder

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

MUSCLE: multiple sequence alignment with high accuracy and high throughput

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Prediction and Functional Analysis of Native Disorder in Proteins from the Three Kingdoms of Life

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Cytoscape: a software environment for integrated models of biomolecular interaction networks

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Increase of functional diversity by alternative splicing

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Oncogenic kinase signalling

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3635989

Tissue-specific alternative splicing remodels protein-protein interaction networks.

7 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003030

Rewiring the dynamic interactome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003030

Close encounters of the third kind: disordered domains and the interactions of proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003030

Assessing the impact of alternative splicing on domain interactions in the human proteome

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PCBI.1003030

10.1371/JOURNAL.PCBI.1003030

21 January 2018

Identifiers

DOI

1 reference

journals/ploscb/ColakKMSIBMBK13

4 August 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

4 August 2017

1 reference