(Q34720556)

English

Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities

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scholarly article

1 reference

Europe PubMed Central

4 August 2017

Potential of a 16S rRNA-based taxonomic microarray for analyzing the rhizosphere effects of maize on Agrobacterium spp. and bacterial communities (English)

1 reference

Europe PubMed Central

4 August 2017

1 reference

based on heuristic

inferred from title

Yvan Moënne-Loccoz

7

object named as

Yvan Moënne-Loccoz

1 reference

Europe PubMed Central

4 August 2017

object named as

Hervé Sanguin

1

0 references

object named as

Xavier Nesme

6

0 references

Timothy M. Vogel

object named as

Timothy M Vogel

5

0 references

Arnaud Dechesne

object named as

Arnaud Dechesne

3

0 references

Jean Thioulouse

object named as

Jean Thioulouse

4

0 references

author name string

Benoît Remenant

2

1 reference

Europe PubMed Central

4 August 2017

Geneviève L Grundmann

8

1 reference

Europe PubMed Central

4 August 2017

language of work or name

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publication date

1 June 2006

1 reference

Europe PubMed Central

4 August 2017

Applied and Environmental Microbiology

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Europe PubMed Central

4 August 2017

72

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Europe PubMed Central

4 August 2017

4302-4312

1 reference

Europe PubMed Central

4 August 2017

6

1 reference

Europe PubMed Central

4 August 2017

Development and validation of a prototype 16S rRNA-based taxonomic microarray for Alphaproteobacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

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Effect of carbon and nitrogen input on the bacterial community structure of Neocaledonian nickel mine spoils

1 reference

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Efficient procedure for purification of obligate intracellular Wolbachia pipientis and representative amplification of its genome by multiple-displacement amplification.

1 reference

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A new approach for the analysis of bacterial microarray-based Comparative Genomic Hybridization: insights from an empirical study

1 reference

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7 July 2018

Microbial co-operation in the rhizosphere

1 reference

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Rapid quantification and taxonomic classification of environmental DNA from both prokaryotic and eukaryotic origins using a microarray.

1 reference

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16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales"

1 reference

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Effects of growth medium, inoculum size, and incubation time on culturability and isolation of soil bacteria

1 reference

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Development of a universal microarray based on the ligation detection reaction and 16S rrna gene polymorphism to target diversity of cyanobacteria

1 reference

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Microarray and functional gene analyses of sulfate-reducing prokaryotes in low-sulfate, acidic fens reveal cooccurrence of recognized genera and novel lineages

1 reference

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Denitrifying bacteria in bulk and maize-rhizospheric soil: diversity and N2O-reducing abilities.

1 reference

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Diversity and seasonal changes of uncultured Planctomycetales in river biofilms

1 reference

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Improving the scaling normalization for high-density oligonucleotide GeneChip expression microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Unravelling rhizosphere-microbial interactions: opportunities and limitations

1 reference

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Studies on the microbial populations of the rhizosphere of big sagebrush ( Artemisia tridentata).

1 reference

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7 July 2018

Prokaryotic diversity and its limits: microbial community structure in nature and implications for microbial ecology

1 reference

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Molecular profiling of rhizosphere microbial communities associated with healthy and diseased black spruce (Picea mariana) seedlings grown in a nursery

1 reference

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The limits of log-ratios

1 reference

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Bellerophon: a program to detect chimeric sequences in multiple sequence alignments

1 reference

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Fingerprinting diazotroph communities in the Chesapeake Bay by using a DNA macroarray

1 reference

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7 July 2018

ARB: a software environment for sequence data

1 reference

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Molecular evidence for novel planctomycete diversity in a municipal wastewater treatment plant

1 reference

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7 July 2018

The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function

1 reference

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7 July 2018

Radioisotopic, culture-based, and oligonucleotide microchip analyses of thermophilic microbial communities in a continental high-temperature petroleum reservoir

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Comparative 16S rDNA and 16S rRNA sequence analysis indicates that Actinobacteria might be a dominant part of the metabolically active bacteria in heavy metal-contaminated bulk and rhizosphere soil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

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Environmental application of array technology: promise, problems and practicalities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Development and validation of a diagnostic microbial microarray for methanotrophs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Diversity and dynamics of microbial communities in soils from agro-ecosystems

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

A Census of rRNA Genes and Linked Genomic Sequences within a Soil Metagenomic Library

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Relationship between spatial and genetic distance in Agrobacterium spp. in 1 cubic centimeter of soil

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

probeBase: an online resource for rRNA-targeted oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Bacterial diversity in maize rhizospheres: conclusions on the use of genetic profiles based on PCR-amplified partial small subunit rRNA genes in ecological studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Molecular analysis of the nitrate-reducing community from unplanted and maize-planted soils

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

A variance-stabilizing transformation for gene-expression microarray data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

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Microbial populations responsible for specific soil suppressiveness to plant pathogens

1 reference

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Parallel characterization of anaerobic toluene- and ethylbenzene-degrading microbial consortia by PCR-denaturing gradient gel electrophoresis, RNA-DNA membrane hybridization, and DNA microarray technology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

High-density microarray of small-subunit ribosomal DNA probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Quantitative detection of microbial genes by using DNA microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Development and evaluation of functional gene arrays for detection of selected genes in the environment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Bulk and rhizosphere soil bacterial communities studied by denaturing gradient gel electrophoresis: plant-dependent enrichment and seasonal shifts revealed

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

7 July 2018

Application of rRNA-targeted oligonucleotide probes in biotechnology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

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The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L.

1 reference

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1 reference

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1 reference

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The diversity-stability debate

1 reference

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1 reference

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Stability and variability in competitive communities

1 reference

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Levels of bacterial community diversity in four arid soils compared by cultivation and 16S rRNA gene cloning.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

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1 reference

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Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

1 reference

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7 July 2018

Prokaryotes: the unseen majority

1 reference

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Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

1 reference

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1 reference

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1 reference

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In situ visualization of high genetic diversity in a natural microbial community

1 reference

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1 reference

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The planctomycetes: emerging models for microbial ecology, evolution and cell biology

1 reference

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1 reference

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7 July 2018

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1 reference

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1 reference

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1 reference

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Phytoremediation.

1 reference

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1 reference

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1 reference

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Optimization of diagnostic microarray for application in analysing landfill methanotroph communities under different plant covers

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26 October 2018

Validation of a more sensitive method for using spotted oligonucleotide DNA microarrays for functional genomics studies on bacterial communities.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1489601

26 October 2018

Design and application of an oligonucleotide microarray for the investigation of compost microbial communities

1 reference

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26 October 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/16751545

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/16751545

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/16751545

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Environmental factors influencing the distribution of rRNA from Verrucomicrobia in soil

1 reference

https://pubmed.ncbi.nlm.nih.gov/16751545

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

ADE-4: a multivariate analysis and graphical display software

1 reference

20 May 2022

https://opencitations.net/index/coci/api/v1/citations/10.1023/A:1018513530268

Identifiers

10.1128/AEM.02686-05

1 reference

Europe PubMed Central

4 August 2017

release_hzx4sxnvxvd5paed2b4depwcau

1 reference

https://api.fatcat.wiki/v0/release/hzx4sxnvxvd5paed2b4depwcau

24 November 2022

based on heuristic

mapped directly with Wikidata item

1 reference

Europe PubMed Central

4 August 2017

1 reference

Europe PubMed Central

4 August 2017

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