(Q37055203)

English

The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function (English)

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

object named as

Niels Iversen

3

0 references

Angelika Lehner

object named as

Angelika Lehner

5

0 references

object named as

Matthias Horn

4

0 references

object named as

Michael Wagner

9

0 references

Michael Schloter

7

object named as

Michael Schloter

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Per Halkjær Nielsen

6

object named as

Per Halkjaer Nielsen

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

author name string

Justyna Adamczyk

1

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Martin Hesselsoe

2

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Peter Roslev

8

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

language of work or name

0 references

publication date

1 November 2003

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Applied and Environmental Microbiology

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

69

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

11

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

6875-6887

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

Direct profiling of environmental microbial populations by thermal dissociation analysis of native rRNAs hybridized to oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

probeBase: an online resource for rRNA-targeted oligonucleotide probes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Evaluation of PCR amplification bias by terminal restriction fragment length polymorphism analysis of small-subunit rRNA and mcrA genes by using defined template mixtures of methanogenic pure cultures and soil DNA extracts

1 reference

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Linking of microorganisms to phenanthrene metabolism in soil by analysis of (13)C-labeled cell lipids

1 reference

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Microbial community composition and function in wastewater treatment plants

1 reference

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29 September 2017

RNA stable isotope probing, a novel means of linking microbial community function to phylogeny.

1 reference

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Oligonucleotide microarray for 16S rRNA gene-based detection of all recognized lineages of sulfate-reducing prokaryotes in the environment

1 reference

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Bacterial discrimination by means of a universal array approach mediated by LDR (ligase detection reaction).

1 reference

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Abundance and phylogenetic affiliation of iron reducers in activated sludge as assessed by fluorescence in situ hybridization and microautoradiography

1 reference

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Bacterial community composition and function in sewage treatment systems

1 reference

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Parallel characterization of anaerobic toluene- and ethylbenzene-degrading microbial consortia by PCR-denaturing gradient gel electrophoresis, RNA-DNA membrane hybridization, and DNA microarray technology.

1 reference

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29 September 2017

The microbial community composition of a nitrifying-denitrifying activated sludge from an industrial sewage treatment plant analyzed by the full-cycle rRNA approach

1 reference

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29 September 2017

Denaturing gradient gel electrophoresis (DGGE) approaches to study the diversity of ammonia-oxidizing bacteria

1 reference

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29 September 2017

High-density microarray of small-subunit ribosomal DNA probes

1 reference

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Identification of the functionally active methanotroph population in a peat soil microcosm by stable-isotope probing

1 reference

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29 September 2017

Cultivation-independent, semiautomatic determination of absolute bacterial cell numbers in environmental samples by fluorescence in situ hybridization

1 reference

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29 September 2017

In situ characterization of Nitrospira-like nitrite-oxidizing bacteria active in wastewater treatment plants

1 reference

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Linking genetic identity and function in communities of uncultured bacteria.

1 reference

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29 September 2017

Direct detection of 16S rRNA in soil extracts by using oligonucleotide microarrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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Portable system for microbial sample preparation and oligonucleotide microarray analysis

1 reference

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Quantitative molecular analysis of the microbial community in marine arctic sediments (Svalbard).

1 reference

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29 September 2017

Rapid method for coextraction of DNA and RNA from natural environments for analysis of ribosomal DNA- and rRNA-based microbial community composition

1 reference

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29 September 2017

Phylogeny of all recognized species of ammonia oxidizers based on comparative 16S rRNA and amoA sequence analysis: implications for molecular diversity surveys

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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PCR bias in ecological analysis: a case study for quantitative Taq nuclease assays in analyses of microbial communities

1 reference

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29 September 2017

Use of combined microautoradiography and fluorescence in situ hybridization to determine carbon metabolism in mixed natural communities of uncultured bacteria from the genus Achromatium.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Natural assemblages of marine proteobacteria and members of the Cytophaga-Flavobacter cluster consuming low- and high-molecular-weight dissolved organic matter

1 reference

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29 September 2017

Stable-isotope probing as a tool in microbial ecology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set.

1 reference

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29 September 2017

Unexpected population distribution in a microbial mat community: sulfate-reducing bacteria localized to the highly oxic chemocline in contrast to a eukaryotic preference for anoxia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Combined microautoradiography-16S rRNA probe technique for determination of radioisotope uptake by specific microbial cell types in situ

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Combination of fluorescent in situ hybridization and microautoradiography-a new tool for structure-function analyses in microbial ecology.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Effect of toxic metals on indigenous soil beta-subgroup proteobacterium ammonia oxidizer community structure and protection against toxicity by inoculated metal-resistant bacteria

1 reference

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29 September 2017

Degradation of phthalate and Di-(2-Ethylhexyl)phthalate by indigenous and inoculated microorganisms in sludge-amended soil

1 reference

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29 September 2017

Bias in template-to-product ratios in multitemplate PCR

1 reference

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29 September 2017

Recovery of a Nitrosomonas-like 16S rDNA sequence group from freshwater habitats

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Phylogenetic probes for analyzing abundance and spatial organization of nitrifying bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Community structure of a microbial mat: the phylogenetic dimension

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

Use of rRNA fluorescence in situ hybridization for measuring the activity of single cells in young and established biofilms.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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1 reference

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1 reference

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29 September 2017

Physiology, biochemistry, and specific inhibitors of CH4, NH4+, and CO oxidation by methanotrophs and nitrifiers

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

29 September 2017

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

27 June 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

27 June 2018

16S rRNA and amoA-based phylogeny of 12 novel betaproteobacterial ammonia-oxidizing isolates: extension of the dataset and proposal of a new lineage within the nitrosomonads

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

4 September 2018

Bicarbonate uptake by marine Crenarchaeota

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

4 September 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

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1 reference

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4 September 2018

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1 reference

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4 September 2018

16S-23S rDNA intergenic spacer and 23S rDNA of anaerobic ammonium-oxidizing bacteria: implications for phylogeny and in situ detection

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

4 September 2018

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4 September 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=262286

4 September 2018

Small ribosomal RNA content in marine Proteobacteria during non-steady-state growth

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602652

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

(13)C incorporation into DNA as a means of identifying the active components of ammonia-oxidizer populations

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602652

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

13C-discrimination during microbial respiration of added C3-, C4- and 13C-labelled sugars to a C3-forest soil.

1 reference

https://pubmed.ncbi.nlm.nih.gov/14602652

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/AEM.69.11.6875-6887.2003

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

18 August 2017

ResearchGate publication ID

0 references

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