(Q34722836)

4 August 2017

title

Power-law dependence of the melting temperature of ubiquitin on the volume fraction of macromolecular crowders (English)

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4 August 2017

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Matthias M Waegele

1

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4 August 2017

Feng Gai

series ordinal

2

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4 August 2017

language of work or name

English

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publication date

1 March 2011

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Journal of Chemical Physics

4 August 2017

published in

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4 August 2017

volume

134

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4 August 2017

issue

9

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4 August 2017

page(s)

095104

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Volume exclusion and soft interaction effects on protein stability under crowded conditions

4 August 2017

cites work

1 reference

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Generalized fundamental measure theory for atomistic modeling of macromolecular crowding

7 July 2018

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Macromolecular crowding induces polypeptide compaction and decreases folding cooperativity

7 July 2018

1 reference

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Dependence of protein folding stability and dynamics on the density and composition of macromolecular crowders

7 July 2018

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Models of macromolecular crowding effects and the need for quantitative comparisons with experiment

7 July 2018

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Kirkwood-Buff theory of molecular and protein association, aggregation, and cellular crowding

7 July 2018

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Effect of macromolecular crowding on protein folding dynamics at the secondary structure level

7 July 2018

1 reference

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Effect of macromolecular crowding on protein binding stability: modest stabilization and significant biological consequences

7 July 2018

1 reference

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Common crowding agents have only a small effect on protein-protein interactions

7 July 2018

1 reference

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Atomistic modeling of macromolecular crowding predicts modest increases in protein folding and binding stability

7 July 2018

1 reference

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Nonadditive effects of mixed crowding on protein stability

7 July 2018

1 reference

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Confinement effects on the kinetics and thermodynamics of protein dimerization

7 July 2018

1 reference

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Macromolecular crowding modulates folding mechanism of alpha/beta protein apoflavodoxin

7 July 2018

1 reference

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Thermodynamics and kinetics of protein folding under confinement

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Crowding effects on the mechanical stability and unfolding pathways of ubiquitin

7 July 2018

1 reference

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The effects of macromolecular crowding on the mechanical stability of protein molecules.

7 July 2018

1 reference

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Macromolecular crowding and its potential impact on nuclear function

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Macromolecular crowding and confinement: biochemical, biophysical, and potential physiological consequences

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Crowding effects on diffusion in solutions and cells

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Residue-level interrogation of macromolecular crowding effects on protein stability.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Temperature-dependent downhill unfolding of ubiquitin. I. Nanosecond-to-millisecond resolved nonlinear infrared spectroscopy

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Molecular crowding enhances native structure and stability of alpha/beta protein flavodoxin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

The influence of macromolecular crowding on HIV-1 protease internal dynamics

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Confinement effects on the thermodynamics of protein folding: Monte Carlo simulations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Molecular crowding enhances native state stability and refolding rates of globular proteins

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Conformational changes during the nanosecond-to-millisecond unfolding of ubiquitin.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

The hydrodynamic radii of macromolecules and their effect on red blood cell aggregation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Protein folding by the effects of macromolecular crowding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Infrared study of the stability and folding kinetics of a 15-residue beta-hairpin

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

How protein thermodynamics and folding mechanisms are altered by the chaperonin cage: molecular simulations

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

The hydration of amides in helices; a comprehensive picture from molecular dynamics, IR, and NMR.

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Effect of a concentrated "inert" macromolecular cosolute on the stability of a globular protein with respect to denaturation by heat and by chaotropes: a statistical-thermodynamic model

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Effects of macromolecular crowding on protein folding and aggregation

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Crowding effects on EcoRV kinetics and binding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Thermodynamics of ubiquitin unfolding

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Structure of ubiquitin refined at 1.8 A resolution

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

The molecular compression of dextran

7 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3064690

Efficacy of macromolecular crowding in forcing proteins to fold

7 July 2018

1 reference

Macromolecular crowding remodels the energy landscape of a protein by favoring a more compact unfolded state

21 January 2018

1 reference

Factors defining effects of macromolecular crowding on protein stability: an in vitro/in silico case study using cytochrome c.

21 January 2018

1 reference

Effects of macromolecular crowding on protein folding and aggregation studied by density functional theory: statics.

21 January 2018

1 reference

Influence of macromolecular crowding on protein-protein association rates--a Brownian dynamics study

21 January 2018

1 reference

Excluded volume as a determinant of macromolecular structure and reactivity

21 January 2018

1 reference

Effect of mixed macromolecular crowding agents on protein folding

21 January 2018

1 reference

Folding and stability of a tryptophan-containing mutant of ubiquitin.

21 January 2018

1 reference

Free energy of sickle hemoglobin polymerization: a scaled-particle treatment for use with dextran as a crowding agent

21 January 2018

1 reference

Effect of dextran on protein stability and conformation attributed to macromolecular crowding

21 January 2018

1 reference

12 December 2020

15N NMR spin relaxation dispersion study of the molecular crowding effects on protein folding under native conditions

1 reference

12 December 2020

Phase separation of asymmetric binary hard-sphere fluids

1 reference

12 December 2020

Free polymer in a colloidal solution

1 reference

12 December 2020

Destabilised mutants of ubiquitin gain equal stability in crowded solutions

1 reference

12 December 2020

Distinguishing between two-state and three-state models for ubiquitin folding

1 reference

12 December 2020

Infrared study of the effect of hydration on the amide I band and aggregation properties of helical peptides

1 reference

12 December 2020

Identifiers

DOI

10.1063/1.3556671

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4 August 2017

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4 August 2017

1 reference