(Q34790376)

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Fish scales and SNP chips: SNP genotyping and allele frequency estimation in individual and pooled DNA from historical samples of Atlantic salmon (Salmo salar).

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Europe PubMed Central

PubMed publication ID

4 August 2017

Fish scales and SNP chips: SNP genotyping and allele frequency estimation in individual and pooled DNA from historical samples of Atlantic salmon (Salmo salar). (English)

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Europe PubMed Central

PubMed publication ID

4 August 2017

Atlantic salmon

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10

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Europe PubMed Central

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4 August 2017

Susan E. Johnston

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Susan E Johnston

1

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Anti Vasemägi

9

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7

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Sigbjørn Lien

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Europe PubMed Central

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4 August 2017

Juha-Pekka Vähä

8

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Juha-Pekka Vähä

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Europe PubMed Central

PubMed publication ID

4 August 2017

author name string

Meri Lindqvist

2

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Europe PubMed Central

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4 August 2017

Eero Niemelä

3

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Europe PubMed Central

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4 August 2017

Panu Orell

4

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Europe PubMed Central

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4 August 2017

Jaakko Erkinaro

5

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Europe PubMed Central

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4 August 2017

Matthew P Kent

6

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4 August 2017

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publication date

3 July 2013

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4 August 2017

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Europe PubMed Central

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4 August 2017

14

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4 August 2017

439

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Europe PubMed Central

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4 August 2017

Temporally stable genetic structure and low migration in an Atlantic salmon population complex: implications for conservation and management

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Spatiotemporal SNP analysis reveals pronounced biocomplexity at the northern range margin of Atlantic cod Gadus morhua.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Cost-effective genome-wide estimation of allele frequencies from pooled DNA in Atlantic salmon (Salmo salar L.).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

SNP-array reveals genome-wide patterns of geographical and potential adaptive divergence across the natural range of Atlantic salmon (Salmo salar).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

The development of a genome wide SNP set for the Barnacle goose Branta leucopsis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

A dense SNP-based linkage map for Atlantic salmon (Salmo salar) reveals extended chromosome homeologies and striking differences in sex-specific recombination patterns

1 reference

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8 July 2018

Application of single nucleotide polymorphisms to non-model species: a technical review.

1 reference

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8 July 2018

Advancing ecological understandings through technological transformations in noninvasive genetics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Adaptation genomics: the next generation

1 reference

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8 July 2018

Interpretation of custom designed Illumina genotype cluster plots for targeted association studies and next-generation sequence validation

1 reference

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8 July 2018

SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Highly cost-efficient genome-wide association studies using DNA pools and dense SNP arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Historic and contemporary levels of genetic variation in two New Zealand passerines with different histories of decline

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Genetic monitoring as a promising tool for conservation and management.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Pooled DNA genotyping on Affymetrix SNP genotyping arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Single nucleotide polymorphism genotyping: biochemistry, protocol, cost and throughput

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

A review on SNP and other types of molecular markers and their use in animal genetics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

8 July 2018

Microevolution in time and space: SNP analysis of historical DNA reveals dynamic signatures of selection in Atlantic cod.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

Life-history and habitat features influence the within-river genetic structure of Atlantic salmon.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

Single-nucleotide polymorphism characterization in species with limited available sequence information: high nucleotide diversity revealed in the avian genome

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

The design and cross-population application of a genome-wide SNP chip for the great tit Parus major.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

A genome-wide scalable SNP genotyping assay using microarray technology

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

Large-scale genotyping of complex DNA.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

Genotype calling and mapping of multisite variants using an Atlantic salmon iSelect SNP array.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

Multiplex preamplification PCR and microsatellite validation enables accurate single nucleotide polymorphism genotyping of historical fish scales.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3716687

26 October 2018

The utility of whole genome amplification for typing compromised forensic samples.

1 reference

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26 October 2018

Idengification of the origin of an Atlantic salmon (Salmo salar L.) population in a recently recolonized river in the Baltic Sea

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-439

21 January 2018

The power and promise of population genomics: from genotyping to genome typing

1 reference

https://pubmed.ncbi.nlm.nih.gov/23819691

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single-nucleotide polymorphism (SNP) discovery and applications of SNP genotyping in nonmodel organisms

1 reference

https://pubmed.ncbi.nlm.nih.gov/23819691

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic and life-history changes associated with fisheries-induced population collapse

1 reference

https://pubmed.ncbi.nlm.nih.gov/23819691

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-14-439

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

Dimensions Publication ID

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PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

4 August 2017

ResearchGate publication ID

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