(Q34827768)

4 August 2017

title

TARE1, a mutated Copia-like LTR retrotransposon followed by recent massive amplification in tomato (English)

1 reference

4 August 2017

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Hao Yin

1

1 reference

4 August 2017

Jing Liu

2

1 reference

4 August 2017

Yingxiu Xu

3

1 reference

4 August 2017

Xing Liu

4

1 reference

4 August 2017

Shaoling Zhang

5

1 reference

4 August 2017

Jianxin Ma

6

1 reference

4 August 2017

Jianchang Du

7

1 reference

4 August 2017

language of work or name

English

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publication date

4 July 2013

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4 August 2017

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4 August 2017

volume

8

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4 August 2017

issue

7

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4 August 2017

page(s)

e68587

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Creative Commons Attribution 4.0 International

4 August 2017

copyright license

start time

4 July 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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A new family of Ty1-copia-like retrotransposons originated in the tomato genome by a recent horizontal transfer event

8 July 2018

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8 July 2018

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Genome-wide comparative analysis of copia retrotransposons in Triticeae, rice, and Arabidopsis reveals conserved ancient evolutionary lineages and distinct dynamics of individual copia families

8 July 2018

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8 July 2018

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Euchromatin and pericentromeric heterochromatin: comparative composition in the tomato genome

8 July 2018

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Recombination, rearrangement, reshuffling, and divergence in a centromeric region of rice

8 July 2018

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Retrotransposon accumulation and satellite amplification mediated by segmental duplication facilitate centromere expansion in rice

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

Plant retrotransposons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3701649

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8 July 2018

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The limits of selection during maize domestication.

8 July 2018

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A Ty3/gypsy retrotransposon-like sequence localizes to the centromeric regions of cereal chromosomes.

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3701649

The paleontology of intergene retrotransposons of maize

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3701649

Retrotransposons of rice involved in mutations induced by tissue culture

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3701649

On the stochastic model for estimation of mutational distance between homologous proteins

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3701649

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8 July 2018

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Origin and evolution of retroelements based upon their reverse transcriptase sequences

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3701649

Evolutionary conservation, diversity and specificity of LTR-retrotransposons in flowering plants: insights from genome-wide analysis and multi-specific comparison

8 July 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Genome-wide characterization of nonreference transposons reveals evolutionary propensities of transposons in soybean.

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Visualization of diffuse centromeres with centromere-specific histone H3 in the holocentric plant Luzula nivea.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

A retrotransposon-mediated gene duplication underlies morphological variation of tomato fruit

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

LTR_STRUC: a novel search and identification program for LTR retrotransposons

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.).

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Molecular and chromosomal evidence for allopolyploidy in soybean

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

A widespread occurrence of extra open reading frames in plant Ty3/gypsy retrotransposons

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Genome-wide analysis of transposon insertion polymorphisms reveals intraspecific variation in cultivated rice.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Bifurcation and enhancement of autonomous-nonautonomous retrotransposon partnership through LTR Swapping in soybean

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

The age of Alu subfamilies

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0068587

Pericentromeric effects shape the patterns of divergence, retention, and expression of duplicated genes in the paleopolyploid soybean

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23861922

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Centromeric retrotransposon lineages predate the maize/rice divergence and differ in abundance and activity

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23861922

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Genome organization of the tomato sun locus and characterization of the unusual retrotransposon Rider

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23861922

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0068587

1 reference

4 August 2017

0 references

1 reference

4 August 2017

1 reference