(Q34868860)

English

Critical roles of interactions among switch I-preceding residues and between switch II and its neighboring alpha-helix in conformational dynamics of the GTP-bound Ras family small GTPases

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scholarly article

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Europe PubMed Central

PubMed publication ID

5 August 2017

Critical roles of interactions among switch I-preceding residues and between switch II and its neighboring alpha-helix in conformational dynamics of the GTP-bound Ras family small GTPases (English)

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Europe PubMed Central

PubMed publication ID

5 August 2017

author name string

Kousuke Matsumoto

1

1 reference

Europe PubMed Central

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5 August 2017

Fumi Shima

2

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5 August 2017

Shin Muraoka

3

1 reference

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5 August 2017

Mitsugu Araki

4

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5 August 2017

Lizhi Hu

5

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5 August 2017

Yuichi Ijiri

6

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5 August 2017

Rina Hirai

7

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5 August 2017

Jingling Liao

8

1 reference

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5 August 2017

Takashi Yoshioka

9

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5 August 2017

Takashi Kumasaka

10

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5 August 2017

Masaki Yamamoto

11

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5 August 2017

Atsuo Tamura

12

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5 August 2017

Tohru Kataoka

13

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5 August 2017

language of work or name

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publication date

9 March 2011

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5 August 2017

number of pages

10

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Journal of Biological Chemistry

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5 August 2017

286

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5 August 2017

17

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5 August 2017

15403-15412

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

Structural Basis for Conformational Dynamics of GTP-bound Ras Protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Characterization of a Ras mutant with identical GDP- and GTP-bound structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Solution structure and dynamics of the small GTPase RalB in its active conformation: significance for effector protein binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Ras oncogenes: split personalities

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Crystal structure of M-Ras reveals a GTP-bound "off" state conformation of Ras family small GTPases.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Refinement of macromolecular structures by the maximum-likelihood method

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

The CCP4 suite: programs for protein crystallography

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Signaling specificity by Ras family GTPases is determined by the full spectrum of effectors they regulate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Targeting RAS signalling pathways in cancer therapy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

The many faces of Ras: recognition of small GTP-binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

The guanine nucleotide-binding switch in three dimensions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Dynamic properties of the Ras switch I region and its importance for binding to effectors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Small GTP-binding proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Crystal structure and functional analysis of Ras binding to its effector phosphoinositide 3-kinase gamma

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

The pre-hydrolysis state of p21(ras) in complex with GTP: new insights into the role of water molecules in the GTP hydrolysis reaction of ras-like proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

M-Ras/R-Ras3, a transforming ras protein regulated by Sos1, GRF1, and p120 Ras GTPase-activating protein, interacts with the putative Ras effector AF6

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Structural basis for the interaction of Ras with RalGDS

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Structure of the Ras-binding domain of RalGEF and implications for Ras binding and signalling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

The 2.2 A crystal structure of the Ras-binding domain of the serine/threonine kinase c-Raf1 in complex with Rap1A and a GTP analogue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Refined crystal structure of the triphosphate conformation of H-ras p21 at 1.35 A resolution: implications for the mechanism of GTP hydrolysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3083163

8 July 2018

Conformational transitions in p21ras and in its complexes with the effector protein Raf-RBD and the GTPase activating protein GAP.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Two conformational states of Ras GTPase exhibit differential GTP-binding kinetics

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Structure of the G60A mutant of Ras: implications for the dominant negative effect

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Processing of X-ray diffraction data collected in oscillation mode

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

MOLREP: an Automated Program for Molecular Replacement

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

PROCHECK: a program to check the stereochemical quality of protein structures

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Perturbation of the conformational equilibria in Ras by selective mutations as studied by 31P NMR spectroscopy

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Crystal structures of Ral-GppNHp and Ral-GDP reveal two binding sites that are also present in Ras and Rap.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Global conformational dynamics in ras.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M110.204933

21 January 2018

Slow conformational dynamics of the guanine nucleotide-binding protein Ras complexed with the GTP analogue GTPgammaS

1 reference

https://pubmed.ncbi.nlm.nih.gov/21388959

12 December 2020

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inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M110.204933

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

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