(Q34946314)

5 August 2017

title

PTPN22 association in systemic lupus erythematosus (SLE) with respect to individual ancestry and clinical sub-phenotypes (English)

1 reference

5 August 2017

Joel M Guthridge

9

0 references

Jennifer A Kelly

Jennifer A Kelly

7

0 references

Timothy B. Niewold

Timothy B Niewold

29

0 references

Robert P. Kimberly

Robert P Kimberly

11

0 references

Marta E Alarcón-Riquelme

Marta E Alarcón-Riquelme

36

0 references

Sang-Cheol Bae

Sang-Cheol Bae

35

0 references

Juan-Manuel Anaya

Juan-Manuel Anaya

32

0 references

Timothy Vyse

25

Timothy J Vyse

1 reference

5 August 2017

19

John D Reveille

1 reference

5 August 2017

38

John B Harley

1 reference

5 August 2017

40

Judith A James

1 reference

5 August 2017

18

Michelle A Petri

1 reference

5 August 2017

24

Carl D Langefeld

1 reference

5 August 2017

22

Barry I Freedman

1 reference

5 August 2017

33

Gary S Gilkeson

1 reference

5 August 2017

39

Lindsey A Criswell

1 reference

5 August 2017

34

Patrick M Gaffney

1 reference

5 August 2017

23

Betty P Tsao

1 reference

5 August 2017

13

Graciela S Alarcón

1 reference

5 August 2017

31

Joan T Merrill

1 reference

5 August 2017

Rosalind Ramsey-Goldman

17

Rosalind Ramsey-Goldman

1 reference

5 August 2017

21

Susan A Boackle

1 reference

5 August 2017

14

Jeffrey C Edberg

1 reference

5 August 2017

1

Bahram Namjou

1 reference

Bernardo Antonio Pons-Estel

5 August 2017

27

Bernardo Pons-Estel

1 reference

5 August 2017

5

Sharon A Chung

1 reference

5 August 2017

30

Kathy L Moser Sivils

1 reference

Argentine Collaborative Group

5 August 2017

28

Argentine Collaborative Group

1 reference

5 August 2017

41

Swapan K Nath

1 reference

5 August 2017

3

Celi Sun

1 reference

5 August 2017

2

Xana Kim-Howard

1 reference

5 August 2017

16

Jiyoung Choi

1 reference

BIOLUPUS and GENLES Networks

5 August 2017

37

BIOLUPUS and GENLES Networks

1 reference

5 August 2017

Adam Adler

4

1 reference

5 August 2017

Kenneth M Kaufman

6

1 reference

5 August 2017

Stuart B Glenn

8

1 reference

5 August 2017

Robert H Scofield

10

1 reference

5 August 2017

Elizabeth E Brown

12

1 reference

5 August 2017

Jae-Hoon Kim

15

1 reference

5 August 2017

Luis M Vilá

20

1 reference

5 August 2017

Chaim O Jacob

26

1 reference

5 August 2017

language of work or name

English

0 references

publication date

7 August 2013

1 reference

5 August 2017

1 reference

5 August 2017

volume

8

1 reference

5 August 2017

issue

8

1 reference

5 August 2017

page(s)

e69404

1 reference

Creative Commons Attribution 4.0 International

5 August 2017

copyright license

start time

7 August 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

A disease-associated PTPN22 variant promotes systemic autoimmunity in murine models

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Autoimmunity risk alleles: hotspots in B cell regulatory signaling pathways.

8 July 2018

1 reference

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The autoimmune-predisposing variant of lymphoid tyrosine phosphatase favors T helper 1 responses.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

The putative role of the C1858T polymorphism of protein tyrosine phosphatase PTPN22 gene in autoimmunity.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Variation in the ICAM1-ICAM4-ICAM5 locus is associated with systemic lupus erythematosus susceptibility in multiple ancestries

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

PTPN22 1858C>T polymorphism distribution in Europe and association with rheumatoid arthritis: case-control study and meta-analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

The PTPN22 allele encoding an R620W variant interferes with the removal of developing autoreactive B cells in humans

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Identification of novel genetic susceptibility loci in African American lupus patients in a candidate gene association study

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Why is PTPN22 a good candidate susceptibility gene for autoimmune disease?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Identification of a systemic lupus erythematosus susceptibility locus at 11p13 between PDHX and CD44 in a multiethnic study

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Analysis of the influence of PTPN22 gene polymorphisms in systemic sclerosis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

PTPN22 gene polymorphisms in autoimmune diseases with special reference to systemic lupus erythematosus disease susceptibility.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Genetics and beyond--the transcriptome of human monocytes and disease susceptibility

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Genome-wide association study in a Chinese Han population identifies nine new susceptibility loci for systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Potential etiologic and functional implications of genome-wide association loci for human diseases and traits

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Cutting edge: the PTPN22 allelic variant associated with autoimmunity impairs B cell signaling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

A loss-of-function variant of PTPN22 is associated with reduced risk of systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Case-control association analysis of rheumatoid arthritis with candidate genes using related cases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Meta-genetic association of rheumatoid arthritis and PTPN22 using PedGenie 2.1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Polymorphisms in the PTPN22 region are associated with psoriasis of early onset.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Genome-wide association scan in women with systemic lupus erythematosus identifies susceptibility variants in ITGAM, PXK, KIAA1542 and other loci

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

PLINK: a tool set for whole-genome association and population-based linkage analyses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

WHAP: haplotype-based association analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Principal components analysis corrects for stratification in genome-wide association studies

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

The PTPN22 C1858T functional polymorphism and autoimmune diseases--a meta-analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

PTPN22: setting thresholds for autoimmunity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Autoimmune-associated lymphoid tyrosine phosphatase is a gain-of-function variant

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

The R620W C/T polymorphism of the gene PTPN22 is associated with SLE independently of the association of PDCD1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Analysis of families in the multiple autoimmune disease genetics consortium (MADGC) collection: the PTPN22 620W allele associates with multiple autoimmune phenotypes.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Association of a functional single-nucleotide polymorphism of PTPN22, encoding lymphoid protein phosphatase, with rheumatoid arthritis and systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Haploview: analysis and visualization of LD and haplotype maps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Genetic association of the R620W polymorphism of protein tyrosine phosphatase PTPN22 with human SLE.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

A missense single-nucleotide polymorphism in a gene encoding a protein tyrosine phosphatase (PTPN22) is associated with rheumatoid arthritis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

The prevalence, onset, and clinical significance of antiphospholipid antibodies prior to diagnosis of systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

A functional variant of lymphoid tyrosine phosphatase is associated with type I diabetes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Differences by race, sex and age in the clinical and immunologic features of recently diagnosed systemic lupus erythematosus patients in the southeastern United States.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Use of unlinked genetic markers to detect population stratification in association studies.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Systemic lupus erythematosus in three ethnic groups: I. The effects of HLA class II, C4, and CR1 alleles, socioeconomic factors, and ethnicity at disease onset. LUMINA Study Group. Lupus in minority populations, nature versus nurture

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Updating the American College of Rheumatology revised criteria for the classification of systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Influence of the antiphospholipid syndrome in the survival of patients with systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

The 1982 revised criteria for the classification of systemic lupus erythematosus

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Morbidity of systemic lupus erythematosus: role of race and socioeconomic status

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Association between the PTPN22 gene and rheumatoid arthritis and juvenile idiopathic arthritis in a UK population: further support that PTPN22 is an autoimmunity gene

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

The PTPN22 620W allele is a risk factor for Wegener's granulomatosis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

Association of the PTPN22*R620W polymorphism with autoimmune myasthenia gravis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

The codon 620 tryptophan allele of the lymphoid tyrosine phosphatase (LYP) gene is a major determinant of Graves' disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

Mutation screening of PTPN22: association of the 1858T-allele with Addison's disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

A single-nucleotide polymorphism in the gene encoding lymphoid protein tyrosine phosphatase (PTPN22) confers susceptibility to generalised vitiligo

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

PTPN22 and autoimmune disease

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

PTPN22 C1858T polymorphism in Colombian patients with autoimmune diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

Lack of the phosphatase PTPN22 increases adhesion of murine regulatory T cells to improve their immunosuppressive function.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

CSK regulatory polymorphism is associated with systemic lupus erythematosus and influences B-cell signaling and activation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

A multiethnic, multicenter cohort of patients with systemic lupus erythematosus (SLE) as a model for the study of ethnic disparities in SLE.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

Ethnic differences in allele frequency of autoimmune-disease-associated SNPs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

The association between the PTPN22 C1858T polymorphism and systemic lupus erythematosus: a meta-analysis update

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

The autoimmune disease-associated PTPN22 variant promotes calpain-mediated Lyp/Pep degradation associated with lymphocyte and dendritic cell hyperresponsiveness.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

PTPN22/LYP 1858C>T gene polymorphism and susceptibility to endometriosis in a Polish population

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

CTLA-4 CT60 polymorphism in thyroid and polyglandular autoimmunity

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Contribution of the R620W polymorphism of protein tyrosine phosphatase non-receptor 22 to systemic lupus erythematosus in Poland

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3737240

Evaluation of the genetic association of thePTPN22 R620W polymorphism in familial and sporadic systemic lupus erythematosus

26 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

The PTPN22 R263Q polymorphism is a risk factor for rheumatoid arthritis in Caucasian case-control samples

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0069404

Lyp breakdown and autoimmunity

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23950893

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Evaluation of the anti-cardiolipin antibody test: report of an international workshop held 4 April 1986

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23950893

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0069404

1 reference

5 August 2017

0 references

1 reference

5 August 2017

1 reference