(Q34985020)

5 August 2017

title

Transcriptomic characterization of cold acclimation in larval zebrafish (English)

1 reference

5 August 2017

0 references

0 references

Yong Long

1

1 reference

5 August 2017

Guili Song

2

1 reference

5 August 2017

Junjun Yan

3

1 reference

5 August 2017

Xiaozhen He

4

1 reference

5 August 2017

Qing Li

5

1 reference

5 August 2017

Zongbin Cui

6

1 reference

5 August 2017

language of work or name

English

0 references

publication date

11 September 2013

1 reference

5 August 2017

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5 August 2017

volume

14

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5 August 2017

page(s)

612

1 reference

describes a project that uses

5 August 2017

Cytoscape

object named as

Cytoscape

2 references

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

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Transcriptomic characterization of temperature stress responses in larval zebrafish

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Disruption of the Arabidopsis circadian clock is responsible for extensive variation in the cold-responsive transcriptome

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

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8 July 2018

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Nucleocytoplasmic shuttling of STK16 (PKL12), a Golgi-resident serine/threonine kinase involved in VEGF expression regulation.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Temperature regulates transcription in the zebrafish circadian clock

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

BiNGO: a Cytoscape plugin to assess overrepresentation of gene ontology categories in biological networks

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Coping with cold: An integrative, multitissue analysis of the transcriptome of a poikilothermic vertebrate

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Metabolic responses to low temperature in fish muscle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Protein folding and misfolding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

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8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Ribosome assembly in eukaryotes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Differential gene expression in the brain of channel catfish ( Ictalurus punctatus) in response to cold acclimation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Processing of gene expression data generated by quantitative real-time RT-PCR.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

MAP kinase pathways activated by stress: the p38 MAPK pathway

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Regulation of p53 in response to DNA damage

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

DNA damage induces phosphorylation of the amino terminus of p53

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Hypoxia induces accumulation of p53 protein, but activation of a G1-phase checkpoint by low-oxygen conditions is independent of p53 status.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

8 July 2018

How does a protein fold?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Mechanisms of temperature acclimation in the carp: a molecular biology approach

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Low temperature interrupts circadian regulation of transcriptional activity in chilling-sensitive plants

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Effect of cold acclimation on troponin I isoform expression in striated muscle of rainbow trout

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

PPAR gamma protects cardiomyocytes against oxidative stress and apoptosis via Bcl-2 upregulation

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Effects of hypothermia on gene expression in zebrafish gills: upregulation in differentiation and function of ionocytes as compensatory responses

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Metabolomic profiling of rapid cold hardening and cold shock in Drosophila melanogaster.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Alternative splicing regulates the transcriptional activity of Drosophila heat shock transcription factor in response to heat/cold stress.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Changes in gene expression associated with acclimation to constant temperatures and fluctuating daily temperatures in an annual killifish Austrofundulus limnaeus.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

BRAIN LIPID FATTY ACIDS AND TEMPERATURE ACCLIMATION.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Differential regulation of Period 2 and Period 3 expression during development of the zebrafish circadian clock

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Induction of rapid cold hardening by cooling at ecologically relevant rates in Drosophila melanogaster.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Alternative 5' splice site selection induced by heat shock

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3847098

Reduced expression of PER3 is associated with incidence and development of colon cancer

26 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24024969

12 December 2020

inferred from PubMed ID database lookup

Steady-state effects of temperature acclimation on the transcriptome of the rainbow trout heart

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24024969

12 December 2020

inferred from PubMed ID database lookup

Long-term warm or cold acclimation elicits a specific transcriptional response and affects energy metabolism in zebrafish

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24024969

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1186/1471-2164-14-612

1 reference

5 August 2017

1 reference

5 August 2017

1 reference