(Q35002460)

5 August 2017

title

Transcription of endogenous and exogenous R2 elements in the rRNA gene locus of Drosophila melanogaster (English)

1 reference

5 August 2017

Transcription of Endogenous and Exogenous R2 Elements in the rRNA Gene Locus of Drosophila melanogaster (English)

1 reference

Crossref

https://api.crossref.org/works/10.1128/MCB.23.11.3825-3836.2003

2 January 2024

main subject

Drosophila melanogaster

0 references

transcription

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

2 January 2024

1 reference

https://api.crossref.org/works/10.1128/MCB.23.11.3825-3836.2003

2 January 2024

2

Thomas H. Eickbush

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

2 January 2024

author name string

Danna G. Eickbush

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

2 January 2024

language of work or name

English

0 references

publication date

1 June 2003

1 reference

full work available at URL

5 August 2017

https://mcb.asm.org/content/23/11/3825.full.pdf

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

https://europepmc.org/articles/PMC155226

2 January 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

https://europepmc.org/articles/PMC155226?pdf=render

2 January 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

https://doi.org/10.1128/mcb.23.11.3825-3836.2003

2 January 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A12748285

https://journals.asm.org/doi/pdf/10.1128/MCB.23.11.3825-3836.2003

2 January 2024

1 reference

Crossref

https://api.crossref.org/works/10.1128/MCB.23.11.3825-3836.2003

https://www.tandfonline.com/doi/pdf/10.1128/MCB.23.11.3825-3836.2003

2 January 2024

1 reference

Crossref

https://api.crossref.org/works/10.1128/MCB.23.11.3825-3836.2003

Molecular and Cellular Biology

2 January 2024

published in

1 reference

5 August 2017

volume

23

1 reference

5 August 2017

issue

11

1 reference

5 August 2017

page(s)

3825-3836

1 reference

describes a project that uses

5 August 2017

ImageQuant

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC155226/fullTextXML

inferred from PubMed Central ID database lookup

cites work

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Rates of R1 and R2 retrotransposition and elimination from the rDNA locus of Drosophila melanogaster

8 July 2018

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Ribosomal gene clusters are uniquely proportioned between open and closed chromatin structures in both tomato leaf cells and exponentially growing suspension cultures

8 July 2018

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Dynamics of R1 and R2 elements in the rDNA locus of Drosophila simulans

8 July 2018

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8 July 2018

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Identification of the endonuclease domain encoded by R2 and other site-specific, non-long terminal repeat retrotransposable elements

8 July 2018

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The domain structure and retrotransposition mechanism of R2 elements are conserved throughout arthropods

8 July 2018

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Multigene family of ribosomal DNA in Drosophila melanogaster reveals contrasting patterns of homogenization for IGS and ITS spacer regions. A possible mechanism to resolve this paradox

8 July 2018

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Are retrotransposons long-term hitchhikers?

8 July 2018

1 reference

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A single lineage of r2 retrotransposable elements is an active, evolutionarily stable component of the Drosophila rDNA locus.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

The repeat organizer, a specialized insulator element within the intergenic spacer of the Xenopus rRNA genes

8 July 2018

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Chromatin structure and methylation of rat rRNA genes studied by formaldehyde fixation and psoralen cross-linking

8 July 2018

1 reference

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Human L1 retrotransposon encodes a conserved endonuclease required for retrotransposition

8 July 2018

1 reference

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Analysis of the 5' junctions of R2 insertions with the 28S gene: implications for non-LTR retrotransposition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Downstream 28S gene sequences on the RNA template affect the choice of primer and the accuracy of initiation by the R2 reverse transcriptase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

R4, a non-LTR retrotransposon specific to the large subunit rRNA genes of nematodes

8 July 2018

1 reference

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Vertical transmission of the retrotransposable elements R1 and R2 during the evolution of the Drosophila melanogaster species subgroup

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Reverse transcription of R2Bm RNA is primed by a nick at the chromosomal target site: a mechanism for non-LTR retrotransposition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Transcription in the yeast rRNA gene locus: distribution of the active gene copies and chromatin structure of their flanking regulatory sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

RNA template requirements for target DNA-primed reverse transcription by the R2 retrotransposable element

8 July 2018

1 reference

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Unequal crossing over at the rRNA tandon as a source of quantitative genetic variation in Drosophila.

8 July 2018

1 reference

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The rare transcripts of interrupted rRNA genes in Drosophila melanogaster are processed or degraded during synthesis

8 July 2018

1 reference

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Drosophila melanogaster ribosomal DNA containing type II insertions is variably transcribed in different strains and tissues.

8 July 2018

1 reference

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Structure and Expression of Ribosomal RNA Genes of Drosophila melanogaster Interrupted by Type-2 Insertions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Nuclear RNA transcripts from Drosophila melanogaster ribosomal RNA genes containing introns

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Correlations between development rates, enzyme activities, ribosomal DNA spacer-length phenotypes, and adaptation in Drosophila melanogaster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Evolution of the ribosomal DNA spacers of Drosophila melanogaster: different patterns of variation on X and Y chromosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Preferential DNase I sensitivity of insert-free ribosomal RNA repeats of Drosophila melanogaster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Structure and tissue-specific developmental expression of a sea urchin arylsulfatase gene

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Two different chromatin structures coexist in ribosomal RNA genes throughout the cell cycle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Isolation and characterization of ribosomal DNA variants from Sciara coprophila

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Type I (R1) and type II (R2) ribosomal DNA insertions of Drosophila melanogaster are retrotransposable elements closely related to those of Bombyx mori

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Turnover of R1 (type I) and R2 (type II) retrotransposable elements in the ribosomal DNA of Drosophila melanogaster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Ultrastructural patterns of RNA synthesis during early embryogenesis of Drosophila melanogaster.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Studies on the ribosomal RNA cistrons in interspecific Drosophila hybrids. I. Nucleolar dominance

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Expression of ribosomal DNA insertions in drosophila melanogaster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

The occurrence of long transcription units among the X and Y ribosomal genes of Drosophila melanogaster: Transcription of insertion sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Multiple lineages of R1 retrotransposable elements can coexist in the rDNA loci of Drosophila.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

Expression of the ribosomal DNA insertions in bobbed mutants of Drosophila melanogaster.

26 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=155226

The nucleolus in primary spermatocytes of Drosophila hydei

26 October 2018

1 reference

12 December 2020

Transcription of rDNA insertions in bobbed mutants of Drosophila melanogaster

1 reference

12 December 2020

Population genetics of the Y chromosome of Drosophila melanogaster: rDNA variation and phenotypic correlates

1 reference

12 December 2020

The occurrence of long ribosomal transcripts homologous to type I insertions in bobbed mutants of Drosophila melanogaster

1 reference

12 December 2020

Identifiers

1 reference

5 August 2017

1 reference

5 August 2017

1 reference