(Q35013532)

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Pyrosequencing-based profiling of archaeal and bacterial 16S rRNA genes identifies a novel archaeon associated with black band disease in corals

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scholarly article

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Europe PubMed Central

PubMed publication ID

5 August 2017

Pyrosequencing-based profiling of archaeal and bacterial 16S rRNA genes identifies a novel archaeon associated with black band disease in corals (English)

1 reference

Europe PubMed Central

PubMed publication ID

5 August 2017

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based on heuristic

inferred from title

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

3

object named as

David G Bourne

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

2

object named as

Bette L Willis

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

publication date

24 September 2013

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Europe PubMed Central

PubMed publication ID

5 August 2017

Environmental Microbiology

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Europe PubMed Central

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

15

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

11

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Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

2994-3007

1 reference

Europe PubMed Central

PubMed publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24112537%20AND%20SRC:MED&resulttype=core&format=json

1 June 2020

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Vibrio sp. as a potentially important member of the Black Band Disease (BBD) consortium in Favia sp. corals

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Characterization of black band disease in Red Sea stony corals.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Abundance and phylogenetic identity of archaeoplankton in the permanent oxygen minimum zone of the eastern tropical South Pacific.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Changes in sulfate-reducing bacterial populations during the onset of black band disease

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Sulfur-oxidizing bacterial populations within cyanobacterial dominated coral disease lesions.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Phylogeny and evolution of the Archaea: one hundred genomes later

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

The versatile epsilon-proteobacteria: key players in sulphidic habitats

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Trichodesmium, a Globally Significant Marine Cyanobacterium

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

QIIME allows analysis of high-throughput community sequencing data

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Archaea--timeline of the third domain

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Characterization of the bacterial consortium associated with black band disease in coral using molecular microbiological techniques.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Cross-ocean distribution of Rhodobacterales bacteria as primary surface colonizers in temperate coastal marine waters

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Archaea in coastal marine environments

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Everything in moderation: archaea as 'non-extremophiles'.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Sediment-associated microdiversity within the Marine Group I Crenarchaeota

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Search and clustering orders of magnitude faster than BLAST

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

UCHIME improves sensitivity and speed of chimera detection

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Novel primers for 16S rRNA-based archaeal community analyses in environmental samples

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Biogeochemical conditions determine virulence of black band disease in corals.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Comparison of deep-sea sediment microbial communities in the Eastern Mediterranean

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Methane-consuming archaebacteria in marine sediments

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Bacterial diversity in Solenopsis invicta and Solenopsis geminata ant colonies characterized by 16S amplicon 454 pyrosequencing

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Coral disease dynamics in the central Philippines.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Archaeal dominance in the mesopelagic zone of the Pacific Ocean

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Diversity of Archaea in marine sediments from Skan Bay, Alaska, including cultivated methanogens, and description of Methanogenium boonei sp. nov

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Anaerobic oxidation of methane: progress with an unknown process

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Diversity and distribution of methanotrophic archaea at cold seeps

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Isolation of an autotrophic ammonia-oxidizing marine archaeon

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Predominant archaea in marine sediments degrade detrital proteins.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Methanobacterium beijingense sp. nov., a novel methanogen isolated from anaerobic digesters

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

A meta-analysis of 16S rRNA gene clone libraries from the polymicrobial black band disease of corals

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

First description of giant Archaea (Thaumarchaeota) associated with putative bacterial ectosymbionts in a sulfidic marine habitat.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

In vitro demonstration of anaerobic oxidation of methane coupled to sulphate reduction in sediment from a marine gas hydrate area

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Environmental regulation of the anaerobic oxidation of methane: a comparison of ANME-I and ANME-II communities

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Archaeal diversity associated with in situ samplers deployed on hydrothermal vents on the East Pacific Rise (13 degrees N).

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

On the relationship between methane production and oxidation by anaerobic methanotrophic communities from cold seeps of the Gulf of Mexico

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

A molecular view of microbial diversity and the biosphere

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https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Characterization of the prokaryotic diversity in cold saline perennial springs of the Canadian high Arctic

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https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

A psychrophilic crenarchaeon inhabits a marine sponge: Cenarchaeum symbiosum gen. nov., sp. nov

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Pseudoscillatoria coralii gen. nov., sp. nov., a cyanobacterium associated with coral black band disease (BBD).

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Diversity and stratification of archaea in a hypersaline microbial mat

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Natural communities of novel archaea and bacteria growing in cold sulfurous springs with a string-of-pearls-like morphology

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Dynamics of seasonal outbreaks of black band disease in an assemblage of Montipora species at Pelorus Island (Great Barrier Reef, Australia).

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Successional changes in bacterial communities during the development of black band disease on the reef coral, Montipora hispida

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Genomic studies of uncultivated archaea

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Global distribution and diversity of coral-associated Archaea and their possible role in the coral holobiont nitrogen cycle

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Isolation and characterization of new strains of methanogens from cold terrestrial habitats.

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

A single cyanobacterial ribotype is associated with both red and black bands on diseased corals from Palau

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Rapid detection and quantification of members of the archaeal community by quantitative PCR using fluorogenic probes

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https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Coral diseases near Lee Stocking Island, Bahamas: patterns and potential drivers

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Nitrosopumilus maritimus genome reveals unique mechanisms for nitrification and autotrophy in globally distributed marine crenarchaea

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Halobacterium jilantaiense sp. nov., a halophilic archaeon isolated from a saline lake in Inner Mongolia, China

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

A marine microbial consortium apparently mediating anaerobic oxidation of methane

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Molecular biogeochemistry of sulfate reduction, methanogenesis and the anaerobic oxidation of methane at Gulf of Mexico cold seeps

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

Metabolic activity of subsurface life in deep-sea sediments

1 reference

https://api.crossref.org/works/10.1111%2F1462-2920.12256

21 January 2018

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