(Q35013569)

5 August 2017

title

Histoplasma yeast and mycelial transcriptomes reveal pathogenic-phase and lineage-specific gene expression profiles (English)

1 reference

5 August 2017

0 references

Chad A Rappleye

6

0 references

author name string

Jessica A Edwards

1

1 reference

5 August 2017

Chenxi Chen

2

1 reference

5 August 2017

Megan M Kemski

3

1 reference

5 August 2017

Jinnan Hu

4

1 reference

5 August 2017

Thomas K Mitchell

5

1 reference

5 August 2017

language of work or name

English

0 references

publication date

10 October 2013

1 reference

5 August 2017

1 reference

5 August 2017

volume

14

1 reference

5 August 2017

page(s)

695

1 reference

Redundant catalases detoxify phagocyte reactive oxygen and facilitate Histoplasma capsulatum pathogenesis

5 August 2017

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Comparative transcriptomics of infectious spores from the fungal pathogen Histoplasma capsulatum reveals a core set of transcripts that specify infectious and pathogenic states

8 July 2018

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8 July 2018

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8 July 2018

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8 July 2018

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Experimental annotation of the human pathogen Histoplasma capsulatum transcribed regions using high-resolution tiling arrays

8 July 2018

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8 July 2018

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8 July 2018

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Definition of the extracellular proteome of pathogenic-phase Histoplasma capsulatum

8 July 2018

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The yeast-phase virulence requirement for α-glucan synthase differs among Histoplasma capsulatum chemotypes

8 July 2018

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Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation

8 July 2018

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8 July 2018

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Macroautophagy and its role in nutrient homeostasis

8 July 2018

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TopHat: discovering splice junctions with RNA-Seq

8 July 2018

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An Atg1/Atg13 complex with multiple roles in TOR-mediated autophagy regulation

8 July 2018

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8 July 2018

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Conserved factors Ryp2 and Ryp3 control cell morphology and infectious spore formation in the fungal pathogen Histoplasma capsulatum

8 July 2018

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Histoplasma requires SID1, a member of an iron-regulated siderophore gene cluster, for host colonization

8 July 2018

1 reference

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Temperature-induced switch to the pathogenic yeast form of Histoplasma capsulatum requires Ryp1, a conserved transcriptional regulator

8 July 2018

1 reference

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KAAS: an automatic genome annotation and pathway reconstruction server

8 July 2018

1 reference

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RNA interference-mediated silencing of the YPS3 gene of Histoplasma capsulatum reveals virulence defects

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Expression and interstrain variability of the YPS3 gene of Histoplasma capsulatum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Histoplasma capsulatum alpha-(1,3)-glucan blocks innate immune recognition by the beta-glucan receptor.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

An alpha-(1,4)-amylase is essential for alpha-(1,3)-glucan production and virulence in Histoplasma capsulatum.

8 July 2018

1 reference

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MEME: discovering and analyzing DNA and protein sequence motifs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Global control of dimorphism and virulence in fungi

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Quantitative real-time PCR protocol for analysis of nuclear receptor signaling pathways

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

The RIN: an RNA integrity number for assigning integrity values to RNA measurements

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Internalization and phagosome escape required for Francisella to induce human monocyte IL-1beta processing and release

8 July 2018

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Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Identification of Histoplasma capsulatum transcripts induced in response to reactive nitrogen species

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Surface localization of the Yps3p protein of Histoplasma capsulatum

8 July 2018

1 reference

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Comprehensive proteomic analysis of Saccharomyces cerevisiae cell walls: identification of proteins covalently attached via glycosylphosphatidylinositol remnants or mild alkali-sensitive linkages.

8 July 2018

1 reference

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Sequence elements necessary for transcriptional activation of BAD1 in the yeast phase of Blastomyces dermatitidis.

8 July 2018

1 reference

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Phylogeography of the fungal pathogen Histoplasma capsulatum

8 July 2018

1 reference

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Autophagy in Yeast: ATOR-Mediated Response to Nutrient Starvation

8 July 2018

1 reference

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Gene prediction with a hidden Markov model and a new intron submodel

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Improving the Arabidopsis genome annotation using maximal transcript alignment assemblies

8 July 2018

1 reference

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Identifying phase-specific genes in the fungal pathogen Histoplasma capsulatum using a genomic shotgun microarray

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

A C-terminal EGF-like domain governs BAD1 localization to the yeast surface and fungal adherence to phagocytes, but is dispensable in immune modulation and pathogenicity of Blastomyces dermatitidis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Molecular mycology: a genetic toolbox for Histoplasma capsulatum.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Intracellular parasitism by Histoplasma capsulatum: fungal virulence and calcium dependence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Applying in vivo expression technology (IVET) to the fungal pathogen Histoplasma capsulatum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Phylogenetic relationships of varieties and geographical groups of the human pathogenic fungus Histoplasma capsulatum Darling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Rare homologous gene targeting in Histoplasma capsulatum: disruption of the URA5Hc gene by allelic replacement.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Electrotransformation and expression of bacterial genes encoding hygromycin phosphotransferase and beta-galactosidase in the pathogenic fungus Histoplasma capsulatum.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Membrane lipid perturbation modifies the set point of the temperature of heat shock response in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Comparative Pathogenicity of Albino and Brown Types of Histoplasma capsulatum for Mice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

RNA splice junctions of different classes of eukaryotes: sequence statistics and functional implications in gene expression

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Irreversible block of the mycelial-to-yeast phase transition of Histoplasma capsulatum

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Variable expression of a yeast-phase-specific gene in Histoplasma capsulatum strains differing in thermotolerance and virulence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

RNA interference in Histoplasma capsulatum demonstrates a role for alpha-(1,3)-glucan in virulence

8 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-695

The genetic basis of variation in susceptibility to infection with Histoplasma capsulatum in the mouse

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-695

Using native and syntenically mapped cDNA alignments to improve de novo gene finding.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-695

A temperature-sensitive strain of Histoplasma capsulatum has an altered delta 9-fatty acid desaturase gene

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-695

TOS1 is circularly permuted 1,3-beta-glucanase.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-14-695

Histoplasma capsulatum utilizes siderophores for intracellular iron acquisition in macrophages

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3852720

Quantitative plating of Histoplasma capsulatum without addition of conditioned medium or siderophores

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24112604

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Monitoring phase-specific gene expression in Histoplasma capsulatum with telomeric GFP fusion plasmids

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24112604

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

1 reference

https://pubmed.ncbi.nlm.nih.gov/24112604

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-14-695

1 reference

5 August 2017

1 reference

5 August 2017

1 reference