(Q35021625)

5 August 2017

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title

Comparative genomics approaches to study organism similarities and differences (English)

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5 August 2017

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3

Inna Dubchak

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5 August 2017

Liping Wei

1

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5 August 2017

Yueyi Liu

series ordinal

2

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5 August 2017

John Shon

series ordinal

4

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5 August 2017

John Park

series ordinal

5

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5 August 2017

publication date

1 April 2002

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Journal of Biomedical Informatics

5 August 2017

published in

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5 August 2017

volume

35

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5 August 2017

issue

2

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5 August 2017

page(s)

142-150

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Whole-genome random sequencing and assembly of Haemophilus influenzae Rd

5 August 2017

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7 January 2021

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. indica)

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7 January 2021

A Draft Sequence of the Rice Genome (Oryza sativa L. ssp. japonica)

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7 January 2021

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7 January 2021

The promise of comparative genomics in mammals

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7 January 2021

Basic local alignment search tool

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7 January 2021

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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7 January 2021

Human and mouse gene structure: comparative analysis and application to exon prediction

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7 January 2021

Fast algorithms for large-scale genome alignment and comparison

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7 January 2021

Alignment of whole genomes

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7 January 2021

PipMaker--a web server for aligning two genomic DNA sequences

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7 January 2021

VISTA : visualizing global DNA sequence alignments of arbitrary length

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7 January 2021

Conservation, regulation, synteny, and introns in a large-scale C. briggsae-C. elegans genomic alignment

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7 January 2021

PatternHunter: faster and more sensitive homology search

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7 January 2021

The computational challenges of applying comparative-based computational methods to whole genomes

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7 January 2021

Comparison of genomic DNA sequences: solved and unsolved problems

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7 January 2021

Genome sequence comparisons: hurdles in the fast lane to functional genomics

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7 January 2021

Surveying Saccharomyces genomes to identify functional elements by comparative DNA sequence analysis.

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7 January 2021

Human chromosome 19 and related regions in mouse: conservative and lineage-specific evolution

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7 January 2021

The DNA sequence and comparative analysis of human chromosome 20

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7 January 2021

Evolutionarily conserved sequences on human chromosome 21

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7 January 2021

A comparison of whole-genome shotgun-derived mouse chromosome 16 and the human genome

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7 January 2021

Genomic-sequence comparison of two unrelated isolates of the human gastric pathogen Helicobacter pylori

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7 January 2021

Genome signature comparisons among prokaryote, plasmid, and mitochondrial DNA

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7 January 2021

Synteny between Arabidopsis thaliana and rice at the genome level: a tool to identify conservation in the ongoing rice genome sequencing project

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Prevalence of small inversions in yeast gene order evolution

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Comparative analysis of the genomes of the bacteria Mycoplasma pneumoniae and Mycoplasma genitalium

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Metabolism and evolution of Haemophilus influenzae deduced from a whole-genome comparison with Escherichia coli

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7 January 2021

Evolution of prokaryotic gene order: genome rearrangements in closely related species.

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7 January 2021

GRIMM: genome rearrangements web server

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7 January 2021

A computer program for aligning a cDNA sequence with a genomic DNA sequence

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7 January 2021

PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames

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7 January 2021

Gene recognition in eukaryotic DNA by comparison of genomic sequences

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7 January 2021

Gene recognition via spliced sequence alignment.

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https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Prediction of complete gene structures in human genomic DNA

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https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Genie--gene finding in Drosophila melanogaster

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7 January 2021

GeneMark.hmm: new solutions for gene finding

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7 January 2021

Characteristic features of the nucleotide sequences of yeast mitochondrial ribosomal protein genes as analyzed by computer program GeneMark.

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7 January 2021

Improved microbial gene identification with GLIMMER

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7 January 2021

Microbial gene identification using interpolated Markov models

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7 January 2021

Integrating genomic homology into gene structure prediction.

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7 January 2021

SGP-1: prediction and validation of homologous genes based on sequence alignments

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7 January 2021

UniBLAST: a system to filter, cluster, and display BLAST results and assign unique gene annotation

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7 January 2021

KEGG: kyoto encyclopedia of genes and genomes

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7 January 2021

Gene ontology: tool for the unification of biology

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7 January 2021

Comparative genomics of the restriction-modification systems in Helicobacter pylori

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7 January 2021

Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles

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7 January 2021

The use of gene clusters to infer functional coupling

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7 January 2021

Genome alignment, evolution of prokaryotic genome organization, and prediction of gene function using genomic context

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7 January 2021

Detecting protein function and protein-protein interactions from genome sequences

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7 January 2021

Protein interaction maps for complete genomes based on gene fusion events

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7 January 2021

Conserved noncoding sequences are reliable guides to regulatory elements.

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Evolutionarily conserved noncoding DNA in the human genome: how much and what for?

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Genomic strategies to identify mammalian regulatory sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Human-mouse genome comparisons to locate regulatory sites

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Long Human–Mouse Sequence Alignments Reveal Novel Regulatory Elements: A Reason to Sequence the Mouse Genome

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Identification of a Coordinate Regulator of Interleukins 4, 13, and 5 by Cross-Species Sequence Comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Analysis of vertebrate SCL loci identifies conserved enhancers

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Long-range comparison of human and mouse SCL loci: localized regions of sensitivity to restriction endonucleases correspond precisely with peaks of conserved noncoding sequences

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Comparative genomic sequence analysis of the human and mouse cystic fibrosis transmembrane conductance regulator genes

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Comparative sequence analysis of 634 kb of the mouse chromosome 16 region of conserved synteny with the human velocardiofacial syndrome region on chromosome 22q11.2.

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Identification of phylogenetic footprints in primate tumor necrosis factor-alpha promoters.

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Comparative analysis of noncoding regions of 77 orthologous mouse and human gene pairs

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Comparative DNA sequence analysis of mouse and human protocadherin gene clusters

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Enrichment of regulatory signals in conserved non-coding genomic sequence

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Active conservation of noncoding sequences revealed by three-way species comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

The sheep genome contributes to localization of control elements in a human gene with complex regulatory mechanisms.

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Comparative chromosome painting discloses homologous segments in distantly related mammals

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Noncoding RNA gene detection using comparative sequence analysis

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Computational identification of noncoding RNAs in E. coli by comparative genomics

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

Shannon information theoretic computation of synonymous codon usage biases in coding regions of human and mouse genomes

1 reference

https://api.crossref.org/works/10.1016%2FS1532-0464%2802%2900506-3

7 January 2021

10.1016/S1532-0464(02)00506-3

Identifiers

DOI

1 reference

5 August 2017

DBLP publication ID

journals/jbi/WeiLDSP02

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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