(Q35034308)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

title

Transcription termination and chimeric RNA formation controlled by Arabidopsis thaliana FPA (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Christian Cole

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Geoffrey J. Barton

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

author name string

Alexander Sherstnev

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

Gordon G Simpson

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

publication date

31 October 2013

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

issue

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

page(s)

e1003867

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

29 February 2020

copyright license

start time

31 October 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

DESeq2

object named as

DESeq

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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8 July 2018

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8 July 2018

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8 July 2018

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Comprehensive analysis of silencing mutants reveals complex regulation of the Arabidopsis methylome.

8 July 2018

1 reference

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Feedback regulation of transcriptional termination by the mammalian circadian clock PERIOD complex

8 July 2018

1 reference

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DNA methylation in an intron of the IBM1 histone demethylase gene stabilizes chromatin modification patterns

8 July 2018

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The poly(A)-binding protein nuclear 1 suppresses alternative cleavage and polyadenylation sites.

8 July 2018

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Genome-wide analysis of plant nat-siRNAs reveals insights into their distribution, biogenesis and function.

8 July 2018

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CTCF-promoted RNA polymerase II pausing links DNA methylation to splicing

8 July 2018

1 reference

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The export factor Yra1 modulates mRNA 3' end processing.

8 July 2018

1 reference

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Mechanisms and consequences of alternative polyadenylation

8 July 2018

1 reference

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Ending the message: poly(A) signals then and now

8 July 2018

1 reference

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The evolutionary origin of orphan genes

8 July 2018

1 reference

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Recurrent chimeric RNAs enriched in human prostate cancer identified by deep sequencing

8 July 2018

1 reference

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RNA 3' processing functions of Arabidopsis FCA and FPA limit intergenic transcription

8 July 2018

1 reference

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Unravelling the means to an end: RNA polymerase II transcription termination.

8 July 2018

1 reference

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Comprehensive polyadenylation site maps in yeast and human reveal pervasive alternative polyadenylation

8 July 2018

1 reference

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Formation, regulation and evolution of Caenorhabditis elegans 3'UTRs

8 July 2018

1 reference

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Alpha-MSH regulates intergenic splicing of MC1R and TUBB3 in human melanocytes

8 July 2018

1 reference

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Crosstalk between mRNA 3' end processing and transcription initiation

8 July 2018

1 reference

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Differential expression analysis for sequence count data

8 July 2018

1 reference

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Expression of conjoined genes: another mechanism for gene regulation in eukaryotes

8 July 2018

1 reference

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PIFs: pivotal components in a cellular signaling hub.

8 July 2018

1 reference

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The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs

8 July 2018

1 reference

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Widespread shortening of 3'UTRs by alternative cleavage and polyadenylation activates oncogenes in cancer cells

8 July 2018

1 reference

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8 July 2018

1 reference

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Genome-wide analysis of mono-, di- and trimethylation of histone H3 lysine 4 in Arabidopsis thaliana

8 July 2018

1 reference

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Transcriptional termination enhances protein expression in human cells

8 July 2018

1 reference

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Transcriptome sequencing to detect gene fusions in cancer

8 July 2018

1 reference

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Noncoding transcription by RNA polymerase Pol IVb/Pol V mediates transcriptional silencing of overlapping and adjacent genes

8 July 2018

1 reference

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Genes involved in pre-mRNA 3'-end formation and transcription termination revealed by a lin-15 operon Muv suppressor screen

8 July 2018

1 reference

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Recognition and elimination of nonsense mRNA.

8 July 2018

1 reference

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Differential interactions of the autonomous pathway RRM proteins and chromatin regulators in the silencing of Arabidopsis targets

8 July 2018

1 reference

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Proliferating cells express mRNAs with shortened 3' untranslated regions and fewer microRNA target sites

8 July 2018

1 reference

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Regulation of alternative polyadenylation by genomic imprinting

8 July 2018

1 reference

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Tandem chimerism as a means to increase protein complexity in the human genome

8 July 2018

1 reference

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Transcription-mediated gene fusion in the human genome

8 July 2018

1 reference

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A role for chromatin remodeling in transcriptional termination by RNA polymerase II.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3814327

Cotranscription and intergenic splicing of human galactose-1-phosphate uridylyltransferase and interleukin-11 receptor alpha-chain genes generate a fusion mRNA in normal cells. Implication for the production of multidomain proteins during evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3814327

The spen family protein FPA controls alternative cleavage and polyadenylation of RNA.

8 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

FY is an RNA 3' end-processing factor that interacts with FCA to control the Arabidopsis floral transition.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Arabidopsis PCFS4, a homologue of yeast polyadenylation factor Pcf11p, regulates FCA alternative processing and promotes flowering time.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Targeted 3' processing of antisense transcripts triggers Arabidopsis FLC chromatin silencing.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Widespread role for the flowering-time regulators FCA and FPA in RNA-mediated chromatin silencing

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Direct sequencing of Arabidopsis thaliana RNA reveals patterns of cleavage and polyadenylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Ago hook and RNA helicase motifs underpin dual roles for SDE3 in antiviral defense and silencing of nonconserved intergenic regions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

NERD, a plant-specific GW protein, defines an additional RNAi-dependent chromatin-based pathway in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Control of genic DNA methylation by a jmjC domain-containing protein in Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

UPF1 is required for nonsense-mediated mRNA decay (NMD) and RNAi in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Cotranscriptional role for Arabidopsis DICER-LIKE 4 in transcription termination.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

The Arabidopsis RNA-binding protein FCA requires a lysine-specific demethylase 1 homolog to downregulate FLC.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

AtMBD9 modulates Arabidopsis development through the dual epigenetic pathways of DNA methylation and histone acetylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Genome-wide analysis of pre-mRNA 3' end processing reveals a decisive role of human cleavage factor I in the regulation of 3' UTR length.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Quantitative Modulation of Polycomb Silencing Underlies Natural Variation in Vernalization

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PGEN.1003867

Functional redundancy and new roles for genes of the autonomous floral-promotion pathway

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24204292

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Loss of FLOWERING LOCUS C activity eliminates the late-flowering phenotype of FRIGIDA and autonomous pathway mutations but not responsiveness to vernalization

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24204292

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PGEN.1003867

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json

29 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24204292%20AND%20SRC:MED&resulttype=core&format=json