(Q35041107)

6 August 2017

title

Haplotype-based genomic sequencing of a chromosomal polymorphism in the white-throated sparrow (Zonotrichia albicollis) (English)

1 reference

6 August 2017

main subject

White-throated Sparrow

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6

Christa L Martin

1 reference

NISC Comparative Sequencing Program

6 August 2017

7

object named as

NISC Comparative Sequencing Program

1 reference

6 August 2017

Jamie K Davis

1

1 reference

6 August 2017

Louis B Mittel

2

1 reference

6 August 2017

Josh J Lowman

3

1 reference

6 August 2017

Pamela J Thomas

4

1 reference

6 August 2017

Donna L Maney

5

1 reference

6 August 2017

James W Thomas

8

1 reference

6 August 2017

publication date

25 May 2011

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6 August 2017

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6 August 2017

volume

102

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6 August 2017

issue

4

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6 August 2017

page(s)

380-390

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Contrasting population genetic patterns within the white-throated sparrow genome (Zonotrichia albicollis).

6 August 2017

cites work

1 reference

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Evolution of a bitter taste receptor gene cluster in a New World sparrow

8 July 2018

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Chromosome-wide linkage disequilibrium caused by an inversion polymorphism in the white-throated sparrow (Zonotrichia albicollis).

8 July 2018

1 reference

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8 July 2018

The genome of a songbird

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The recombination landscape of the zebra finch Taeniopygia guttata genome

8 July 2018

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8 July 2018

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The genomics of speciation in Drosophila: diversity, divergence, and introgression estimated using low-coverage genome sequencing.

8 July 2018

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8 July 2018

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Evolutionary toggling of the MAPT 17q21.31 inversion region

8 July 2018

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The chromosomal polymorphism linked to variation in social behavior in the white-throated sparrow (Zonotrichia albicollis) is a complex rearrangement and suppressor of recombination

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

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8 July 2018

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Variation analysis and gene annotation of eight MHC haplotypes: the MHC Haplotype Project

8 July 2018

1 reference

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The diploid genome sequence of an individual human

8 July 2018

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Principles of genome evolution in the Drosophila melanogaster species group

8 July 2018

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The genomic landscape of short insertion and deletion polymorphisms in the chicken (Gallus gallus) Genome: a high frequency of deletions in tandem duplicates

8 July 2018

1 reference

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Chromosome-wide linkage disequilibrium as a consequence of meiotic drive

8 July 2018

1 reference

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8 July 2018

1 reference

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Chromosome inversions, local adaptation and speciation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Ancient haplotypes of the HLA Class II region

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Dynamics of mammalian chromosome evolution inferred from multispecies comparative maps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

PILER: identification and classification of genomic repeats

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Steps in the evolution of heteromorphic sex chromosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Breakpoint analysis of the pericentric inversion between chimpanzee chromosome 10 and the homologous chromosome 12 in humans

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

An intermediate grade of finished genomic sequence suitable for comparative analyses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

MEGA3: Integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Human and mouse genomic sequences reveal extensive breakpoint reuse in mammalian evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Human-mouse alignments with BLASTZ

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Parallel construction of orthologous sequence-ready clone contig maps in multiple species

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Genome architecture, rearrangements and genomic disorders

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Spidey: a tool for mRNA-to-genomic alignments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

The degeneration of Y chromosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Likelihood ratio tests for detecting positive selection and application to primate lysozyme evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

PAML: a program package for phylogenetic analysis by maximum likelihood

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

PolyPhred: automating the detection and genotyping of single nucleotide substitutions using fluorescence-based resequencing

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Inversions disrupting the factor VIII gene are a common cause of severe haemophilia A

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Reduced effectiveness of selection caused by a lack of recombination.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Behavioral phenotypes persist after gonadal steroid manipulation in white-throated sparrows

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3113616

Chromosomal Polymorphism in the White-Throated Sparrow, Zonotrichia albicollis (Gmelin)

25 October 2018

1 reference

12 December 2020

A CYTOGENETIC STUDY OF THE WHITE-THROATED SPARROW, ZONOTRICHIA ALBICOLLIS (GMELIN).

1 reference

12 December 2020

Molecular probes define different regions of the mouse t complex

1 reference

12 December 2020

Position effect in human genetic disease

1 reference

12 December 2020

Identifiers

DOI

10.1093/JHERED/ESR043

1 reference

6 August 2017

1 reference

6 August 2017

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