(Q35048885)

6 August 2017

title

The RSC chromatin remodelling ATPase translocates DNA with high force and small step size (English)

1 reference

6 August 2017

George Sirinakis

1

1 reference

6 August 2017

Cedric R Clapier

2

1 reference

6 August 2017

Ying Gao

3

1 reference

6 August 2017

Ramya Viswanathan

4

1 reference

6 August 2017

Bradley R Cairns

5

1 reference

6 August 2017

Yongli Zhang

6

1 reference

6 August 2017

language of work or name

English

0 references

publication date

6 May 2011

1 reference

6 August 2017

1 reference

6 August 2017

volume

30

1 reference

6 August 2017

issue

12

1 reference

6 August 2017

page(s)

2364-2372

1 reference

Improved hidden Markov models for molecular motors, part 2: extensions and application to experimental data.

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Improved hidden Markov models for molecular motors, part 1: basic theory

8 July 2018

1 reference

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Single-molecule imaging reveals mechanisms of protein disruption by a DNA translocase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

PcrA helicase dismantles RecA filaments by reeling in DNA in uniform steps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

SWI/SNF has intrinsic nucleosome disassembly activity that is dependent on adjacent nucleosomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Revealing the base pair stepping dynamics of nucleic acid motor proteins with optical traps

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Mechanism of chromatin remodeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Remosomes: RSC generated non-mobilized particles with approximately 180 bp DNA loosely associated with the histone octamer.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Mechanisms of ATP-dependent nucleosome sliding

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Dynamics of nucleosome remodelling by individual ACF complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Chromatin remodeling by imitation switch (ISWI) class ATP-dependent remodelers is stimulated by histone variant H2A.Z.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

The biology of chromatin remodeling complexes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Intersubunit coordination in a homomeric ring ATPase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Structure of a RSC-nucleosome complex and insights into chromatin remodeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Translocation and unwinding mechanisms of RNA and DNA helicases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Dynamic binding orientations direct activity of HIV reverse transcriptase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

The HSA domain binds nuclear actin-related proteins to regulate chromatin-remodeling ATPases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Conformational changes of a Swi2/Snf2 ATPase during its mechano-chemical cycle

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Optical measurement of mechanical forces inside short DNA loops

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Kinetic model for the ATP-dependent translocation of Saccharomyces cerevisiae RSC along double-stranded DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Spring-loaded mechanism of DNA unwinding by hepatitis C virus NS3 helicase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Structure and mechanism of helicases and nucleic acid translocases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Swi3p controls SWI/SNF assembly and ATP-dependent H2A-H2B displacement

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

UvrD helicase unwinds DNA one base pair at a time by a two-part power stroke

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

DNA translocation and loop formation mechanism of chromatin remodeling by SWI/SNF and RSC.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Rsc4 connects the chromatin remodeler RSC to RNA polymerases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Differential detection of dual traps improves the spatial resolution of optical tweezers

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Maximum likelihood estimation of molecular motor kinetics from staircase dwell-time sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Chromatin remodeling by ISW2 and SWI/SNF requires DNA translocation inside the nucleosome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Direct observation of DNA distortion by the RSC complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Ever-fluctuating single enzyme molecules: Michaelis-Menten equation revisited

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Direct observation of base-pair stepping by RNA polymerase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

X-Ray Structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase Core and Its Complex with DNA

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

ATP-dependent chromatin remodeling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Initiation of translocation by Type I restriction-modification enzymes is associated with a short DNA extrusion

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Reaction cycle of the yeast Isw2 chromatin remodeling complex.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Protein displacement by an assembly of helicase molecules aligned along single-stranded DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

ATP-driven exchange of histone H2AZ variant catalyzed by SWR1 chromatin remodeling complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Mechanical disruption of individual nucleosomes reveals a reversible multistage release of DNA.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

A direct optimization approach to hidden Markov modeling for single channel kinetics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Structural basis of gene regulation by the tetracycline inducible Tet repressor-operator system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Nucleosome mobilization catalysed by the yeast SWI/SNF complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Nucleosome movement by CHRAC and ISWI without disruption or trans-displacement of the histone octamer.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Single-molecule enzymatic dynamics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Crystal structure of the nucleosome core particle at 2.8 A resolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3116276

Kinetic measurement of the step size of DNA unwinding by Escherichia coli UvrD helicase

8 July 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Visualization of Rad54, a chromatin remodeling protein, translocating on single DNA molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Removal of promoter nucleosomes by disassembly rather than sliding in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

ATP-dependent histone octamer sliding mediated by the chromatin remodeling complex NURF.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

ISWI induces nucleosome sliding on nicked DNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Chromatin remodeling through directional DNA translocation from an internal nucleosomal site.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Spatial contacts and nucleosome step movements induced by the NURF chromatin remodeling complex

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Real-time observation of DNA translocation by the type I restriction modification enzyme EcoR124I.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Probing SWI/SNF remodeling of the nucleosome by unzipping single DNA molecules.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

The chromatin-remodeling enzyme ACF is an ATP-dependent DNA length sensor that regulates nucleosome spacing

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FEMBOJ.2011.141

Diverse regulation of SNF2h chromatin remodeling by noncatalytic subunits

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21552204

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/EMBOJ.2011.141

1 reference

6 August 2017

1 reference

6 August 2017

1 reference