(Q35072129)

25467442

6 August 2017

title

Genomics and proteomics of mycobacteriophage patience, an accidental tourist in the Mycobacterium neighborhood (English)

1 reference

6 August 2017

0 references

0 references

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

2

Deborah Jacobs-Sera

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

11

Graham F Hatfull

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

author name string

Welkin H Pope

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Daniel A Russell

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Daniel H F Rubin

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Afsana Kajee

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Zama N P Msibi

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Michelle H Larsen

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Jeffrey G Lawrence

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

Roger W Hendrix

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

publication date

2 December 2014

1 reference

6 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

volume

5

1 reference

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10 June 2020

issue

6

1 reference

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10 June 2020

page(s)

e02145

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

Mutational analysis of the mycobacteriophage BPs promoter PR reveals context-dependent sequences for mycobacterial gene expression

10 June 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

HNH proteins are a widespread component of phage DNA packaging machines

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Cluster M mycobacteriophages Bongo, PegLeg, and Rey with unusually large repertoires of tRNA isotypes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Complete genome sequences of 63 mycobacteriophages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Improved bacteriophage genome data is necessary for integrating viral and bacterial ecology

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

High-resolution view of bacteriophage lambda gene expression by ribosome profiling

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Functional requirements for bacteriophage growth: gene essentiality and expression in mycobacteriophage Giles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

On the nature of mycobacteriophage diversity and host preference

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Mycobacteriophage endolysins: diverse and modular enzymes with multiple catalytic activities

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

The secret lives of mycobacteriophages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Complete genome sequences of 138 mycobacteriophages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Phamerator: a bioinformatic tool for comparative bacteriophage genomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Quantification of codon selection for comparative bacterial genomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

The mycobacteriophage Ms6 encodes a chaperone-like protein involved in the endolysin delivery to the peptidoglycan.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Mycobacteriophages: genes and genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Synonymous codon usage analysis of thirty two mycobacteriophage genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Mycobacteriophage Lysin B is a novel mycolylarabinogalactan esterase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Evidence for the intense exchange of MazG in marine cyanophages by horizontal gene transfer

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Exploring the mycobacteriophage metaproteome: phage genomics as an educational platform

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

The HHpred interactive server for protein homology detection and structure prediction

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Variation in the strength of selected codon usage bias among bacteria

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Origins of highly mosaic mycobacteriophage genomes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Comparative phage genomics and the evolution of Siphoviridae: insights from dairy phages

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Deciphering the biology of Mycobacterium tuberculosis from the complete genome sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Transcriptional silencing by the mycobacteriophage L5 repressor

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Transcriptional regulation of repressor synthesis in mycobacteriophage L5.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

DNA sequence, structure and gene expression of mycobacteriophage L5: a phage system for mycobacterial genetics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

The lytic cassette of mycobacteriophage Ms6 encodes an enzyme with lipolytic activity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Gepard: a rapid and sensitive tool for creating dotplots on genome scale.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324244

Synonymous codon usage analysis of the mycobacteriophage Bxz1 and its plating bacteria M. smegmatis: identification of highly and lowly expressed genes of Bxz1 and the possible function of its tRNA species

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25467442

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Functional role of mycobacteriophage transfer RNAs

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25467442

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Characterization of bacteriophages from tox-containing, non-toxigenic isolates of Corynebacterium diphtheriae

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25467442

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1128/MBIO.02145-14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json

10 June 2020

25467442

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25467442%20AND%20SRC:MED&resulttype=core&format=json