(Q35072891)

6 August 2017

Wavelet-based peak detection and a new charge inference procedure for MS/MS implemented in ProteoWizard's msConvert (English)

1 reference

6 August 2017

David L Tabb

10

0 references

author name string

William R French

1

1 reference

6 August 2017

Lisa J Zimmerman

2

1 reference

6 August 2017

Birgit Schilling

3

1 reference

6 August 2017

Bradford W Gibson

4

1 reference

6 August 2017

Christine A Miller

5

1 reference

6 August 2017

R Reid Townsend

6

1 reference

6 August 2017

Stacy D Sherrod

7

1 reference

6 August 2017

Cody R Goodwin

8

1 reference

6 August 2017

John A McLean

9

1 reference

6 August 2017

2 December 2014

1 reference

Journal of Proteome Research

6 August 2017

1 reference

6 August 2017

14

1 reference

6 August 2017

2

1 reference

6 August 2017

1299-1307

1 reference

A cross-platform toolkit for mass spectrometry and proteomics

6 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Quantitative mass spectrometry in proteomics: critical review update from 2007 to the present

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Mass spectrometry-based proteomics: existing capabilities and future directions

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

A dynamic wavelet-based algorithm for pre-processing tandem mass spectrometry data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Quantifying the impact of chimera MS/MS spectra on peptide identification in large-scale proteomics studies.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

IDPicker 2.0: Improved protein assembly with high discrimination peptide identification filtering

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Benchmarking currently available SELDI-TOF MS preprocessing techniques

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Comparison of public peak detection algorithms for MALDI mass spectrometry data analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

DirecTag: accurate sequence tags from peptide MS/MS through statistical scoring

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Spectral probabilities and generating functions of tandem mass spectra: a strike against decoy databases

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

OpenMS - an open-source software framework for mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Analysis and validation of proteomic data generated by tandem mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

High-speed data reduction, feature detection, and MS/MS spectrum quality assessment of shotgun proteomics data sets using high-resolution mass spectrometry

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

VIPER: an advanced software package to support high-throughput LC-MS peptide identification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

LIMPIC: a computational method for the separation of protein MALDI-TOF-MS signals from noise

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

MyriMatch: highly accurate tandem mass spectral peptide identification by multivariate hypergeometric analysis

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Improved peak detection in mass spectrum by incorporating continuous wavelet transform-based pattern matching

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Automatic poisson peak harvesting for high throughput protein identification

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Improving protein identification from peptide mass fingerprinting through a parameterized multi-level scoring algorithm and an optimized peak detection

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Reliable automatic protein identification from matrix-assisted laser desorption/ionization mass spectrometric peptide fingerprints

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

A suite of algorithms for the comprehensive analysis of complex protein mixtures using high-resolution LC-MS.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Determination of peptide and protein ion charge states by Fourier transformation of isotope-resolved mass spectra.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Automated reduction and interpretation of high resolution electrospray mass spectra of large molecules.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

A universal algorithm for fast and automated charge state deconvolution of electrospray mass-to-charge ratio spectra.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4324452

Determination of monoisotopic masses and ion populations for large biomolecules from resolved isotopic distributions

27 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25411686

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1021/PR500886Y

1 reference

release_l3keu7uklnfwdgxjh5ynw3fehi

6 August 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/l3keu7uklnfwdgxjh5ynw3fehi

mapped directly with Wikidata item

24 November 2022

based on heuristic

PMCID

4324452

1 reference

6 August 2017

1 reference