(Q35083196)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

title

Protein database and quantitative analysis considerations when integrating genetics and proteomics to compare mouse strains (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

Shannon K. McWeeney

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

author name string

Phillip A Wilmarth

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

Robert J Hitzemann

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

John K Belknap

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

Larry L David

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

publication date

9 May 2011

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

Journal of Proteome Research

31 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

issue

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

page(s)

2905-2912

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

Tackling the widespread and critical impact of batch effects in high-throughput data

31 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Quantifying E. coli Proteome and Transcriptome with Single-Molecule Sensitivity in Single Cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Comparative shotgun proteomics using spectral count data and quasi-likelihood modeling.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

The complexity of alcohol drinking: studies in rodent genetic models

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Techniques for accurate protein identification in shotgun proteomic studies of human, mouse, bovine, and chicken lenses

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Investigating protein isoforms via proteomics: a feasibility study

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

The membrane proteome of the mouse lens fiber cell.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Estimating accuracy of RNA-Seq and microarrays with proteomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Effect of polymorphisms within probe-target sequences on olignonucleotide microarray experiments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Subcellular proteomics in neuroscience

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

SNPs matter: impact on detection of differential expression.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Proteomic parsimony through bipartite graph analysis improves accuracy and transparency

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

The proteome of the mouse photoreceptor sensory cilium complex

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Adjusting batch effects in microarray expression data using empirical Bayes methods

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Interpretation of shotgun proteomic data: the protein inference problem

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Identification of coexpressed gene clusters in a comparative analysis of transcriptome and proteome in mouse tissues.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Integration of proteomics and genomics in platelets: a profile of platelet proteins and platelet-specific genes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

DTASelect and Contrast: tools for assembling and comparing protein identifications from shotgun proteomics

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Protein pathway and complex clustering of correlated mRNA and protein expression analyses in Saccharomyces cerevisiae

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Significance analysis of microarrays applied to the ionizing radiation response

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Correlation between protein and mRNA abundance in yeast

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Refinements to label free proteome quantitation: how to deal with peptides shared by multiple proteins

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Quantitative proteomics and protein network analysis of hippocampal synapses of CaMKIIalpha mutant mice.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3128464

27 September 2018

Identifiers

DOI

10.1021/PR200133P

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:21553863%20AND%20SRC:MED&resulttype=core&format=json

31 January 2020

1 reference