(Q36876664)

English

Age-related changes in human crystallins determined from comparative analysis of post-translational modifications in young and aged lens: does deamidation contribute to crystallin insolubility?

scientific article published on October 2006

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Age-related changes in human crystallins determined from comparative analysis of post-translational modifications in young and aged lens: does deamidation contribute to crystallin insolubility? (English)

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

object named as

V Bafna

6

0 references

author name string

P A Wilmarth

1

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

S Tanner

2

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

S Dasari

3

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

S R Nagalla

4

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

M A Riviere

5

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

P A Pevzner

7

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

L L David

8

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

publication date

1 October 2006

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

Journal of Proteome Research

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

5

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

10

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

2554-2566

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Human Plasma PeptideAtlas

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

P-Mod: an algorithm and software to map modifications to peptide sequences using tandem MS data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Modifications of human betaA1/betaA3-crystallins include S-methylation, glutathiolation, and truncation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Crystallins in water soluble-high molecular weight protein fractions and water insoluble protein fractions in aging and cataractous human lenses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Post-translational modifications of aquaporin 0 (AQP0) in the normal human lens: spatial and temporal occurrence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

A model for random sampling and estimation of relative protein abundance in shotgun proteomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Laser light-scattering evidence for an altered association of beta B1-crystallin deamidated in the connecting peptide

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Water permeability of C-terminally truncated aquaporin 0 (AQP0 1-243) observed in the aging human lens.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Methylation and carbamylation of human gamma-crystallins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Existence of deamidated alphaB-crystallin fragments in normal and cataractous human lenses.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

BetaB2-crystallin undergoes extensive truncation during aging in human lenses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

S-methylated cysteines in human lens gamma S-crystallins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Error tolerant searching of uninterpreted tandem mass spectrometry data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Deamidation in human gamma S-crystallin from cataractous lenses is influenced by surface exposure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Shotgun identification of protein modifications from protein complexes and lens tissue

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

In vivo carbamylation and acetylation of water-soluble human lens alphaB-crystallin lysine 92

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Efficiency of database search for identification of mutated and modified proteins via mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

The major in vivo modifications of the human water-insoluble lens crystallins are disulfide bonds, deamidation, methionine oxidation and backbone cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Probability-based protein identification by searching sequence databases using mass spectrometry data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

In vivo acetylation identified at lysine 70 of human lens alphaA-crystallin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Quantitation of asparagine-101 deamidation from alpha-A crystallin during aging of the human lens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Sequence analysis of betaA3, betaB3, and betaA4 crystallins completes the identification of the major proteins in young human lens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Post-translational modifications of water-soluble human lens crystallins from young adults

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Method to correlate tandem mass spectra of modified peptides to amino acid sequences in the protein database

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

29 September 2017

Identification of post-translational modifications by blind search of mass spectra.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

27 June 2018

Identifying sites of attachment of UV filters to proteins in older human lenses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

27 June 2018

Increased deamidation of asparagine-101 from alpha-A crystallin in the high molecular weight aggregate of the normal human lens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

27 June 2018

Role of the Maillard reaction in aging of tissue proteins. Advanced glycation end product-dependent increase in imidazolium cross-links in human lens proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

27 June 2018

The search for a solution to senile cataracts. Proctor lecture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

27 June 2018

Unrestrictive identification of post-translational modifications through peptide mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

SPIDER: software for protein identification from sequence tags with de novo sequencing error.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

ModifiComb, a new proteomic tool for mapping substoichiometric post-translational modifications, finding novel types of modifications, and fingerprinting complex protein mixtures.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

InsPecT: identification of posttranslationally modified peptides from tandem mass spectra

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Discovering known and unanticipated protein modifications using MS/MS database searching

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Comparison of label-free methods for quantifying human proteins by shotgun proteomics.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Prediction of primary structure deamidation rates of asparaginyl and glutaminyl peptides through steric and catalytic effects

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Structure-dependent nonenzymatic deamidation of glutaminyl and asparaginyl pentapeptides

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

The need for a public proteomics repository

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Methylglyoxal-derived hydroimidazolone advanced glycation end-products of human lens proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Human beta-crystallins modified by backbone cleavage, deamidation and oxidation are prone to associate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Deamidation, but not truncation, decreases the urea stability of a lens structural protein, betaB1-crystallin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Kynurenine binds to the peptide binding region of the chaperone alphaB-crystallin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Resistance of human betaB2-crystallin to in vivo modification.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Deamidation of Asn-143 of gamma S crystallin from protein aggregates of the human lens

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Mutation-tolerant protein identification by mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Increased cleavage of the c-terminal serine from alpha-A crystallin present in the high molecular weight aggregate fraction from human and bovine lenses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Age-related changes in human lens crystallins identified by HPLC and mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 September 2018

Correlation of Relative Abundance Ratios Derived from Peptide Ion Chromatograms and Spectrum Counting for Quantitative Proteomic Analysis Using Stable Isotope Labeling

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2536618

4 December 2018

Cysteine is the initial site of modification of alpha-crystallin by kynurenine

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Post-translational modification of alphaB-crystallin of normal human lens

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Does post-translational modification influence chaperone-like activity of alpha-crystallin? I. Study on phosphorylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of protein modifications using MS/MS de novo sequencing and the OpenSea alignment algorithm

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Advanced glycation end products in human senile and diabetic cataractous lenses

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of peptide oxidation by tandem mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The polypeptide chains of α-crystallin from old human eye lenses

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Oxidation of the N-terminal methionine of lens alpha-A crystallin

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increased deamidation of asparagine during human senile cataractogenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Enhanced C-terminal truncation of alphaA- and alphaB-crystallins in diabetic lenses

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A method for reducing the time required to match protein sequences with tandem mass spectra

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deamidation of Human βB1 Alters the Elongated Structure of the Dimer

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modifications of the water-insoluble human lens alpha-crystallins

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Deamidation of alpha-A crystallin from nuclei of cataractous and normal human lenses

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Expression of betaA2-crystallin in human lenses

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mining genomes: correlating tandem mass spectra of modified and unmodified peptides to sequences in nucleotide databases

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Experimental Protein Mixture for Validating Tandem Mass Spectral Analysis

1 reference

https://pubmed.ncbi.nlm.nih.gov/17022627

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1021/PR050473A

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

16 August 2017

ResearchGate publication ID

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