(Q35101237)

6 August 2017

title

An evolutionary ratchet leading to loss of elongation factors in eukaryotes (English)

1 reference

6 August 2017

Piotr Kamenski

7

0 references

Gemma Atkinson

Gemma C Atkinson

1

0 references

Vasili Hauryliuk

Vasili Hauryliuk

8

0 references

Tanel Tenson

Tanel Tenson

5

0 references

Anton Kuzmenko

2

Anton Kuzmenko

1 reference

6 August 2017

Ivan Chicherin

3

1 reference

6 August 2017

Axel Soosaar

4

1 reference

6 August 2017

Martin Carr

6

1 reference

6 August 2017

publication date

24 February 2014

1 reference

6 August 2017

published in

BMC Evolutionary Biology

1 reference

6 August 2017

volume

14

1 reference

6 August 2017

issue

1

1 reference

6 August 2017

page(s)

35

1 reference

Parallel re-modeling of EF-1α function: divergent EF-1α genes co-occur with EFL genes in diverse distantly related eukaryotes

6 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

The many roles of the eukaryotic elongation factor 1 complex

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

The gut fungus Basidiobolus ranarum has a large genome and different copy numbers of putatively functionally redundant elongation factor genes

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Evidence that eukaryotic translation elongation factor 1A (eEF1A) binds the Gcn2 protein C terminus and inhibits Gcn2 activity

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Evolution of elongation factor G and the origins of mitochondrial and chloroplast forms

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Omnipotent role of archaeal elongation factor 1 alpha (EF1 ) in translational elongation and termination, and quality control of protein synthesis

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

The Pfam protein families database

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

The Crystal Structure of the Ribosome Bound to EF-Tu and Aminoacyl-tRNA

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Distribution and phylogeny of EFL and EF-1alpha in Euglenozoa suggest ancestral co-occurrence followed by differential loss

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Gain and loss of elongation factor genes in green algae

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Evolution of nonstop, no-go and nonsense-mediated mRNA decay and their termination factor-derived components

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Tracing back EFL gene evolution in the cryptomonads-haptophytes assemblage: separate origins of EFL genes in haptophytes, photosynthetic cryptomonads, and goniomonads

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Direct phylogenetic evidence for lateral transfer of elongation factor-like gene

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Kinetics of the interactions between yeast elongation factors 1A and 1Balpha, guanine nucleotides, and aminoacyl-tRNA.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

eEF1B: At the dawn of the 21st century.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

The SWISS-MODEL workspace: a web-based environment for protein structure homology modelling

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

MAFFT version 5: improvement in accuracy of multiple sequence alignment

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

A class of eukaryotic GTPase with a punctate distribution suggesting multiple functional replacements of translation elongation factor 1alpha

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Solution structure of human initiation factor eIF2alpha reveals homology to the elongation factor eEF1B

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Genome evolution in yeasts

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

GeneDB: a resource for prokaryotic and eukaryotic organisms

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

MRBAYES: Bayesian inference of phylogenetic trees

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Crystal structures of nucleotide exchange intermediates in the eEF1A-eEF1Balpha complex

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Structural basis for nucleotide exchange and competition with tRNA in the yeast elongation factor complex eEF1A:eEF1Balpha

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Increased expression of Saccharomyces cerevisiae translation elongation factor 1 alpha bypasses the lethality of a TEF5 null allele encoding elongation factor 1 beta.

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Animals and fungi are each other's closest relatives: congruent evidence from multiple proteins

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Eukaryotic protein elongation factors

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Purification and properties of an elongation factor functionally analogous to bacterial elongation factor Ts from embryos of Artemia salina

9 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3938643

Kinetic mechanism of elongation factor Ts-catalyzed nucleotide exchange in elongation factor Tu.

9 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-14-35

Evolution of elongation factor-like (EFL) protein in Rhizaria is revised by radiolarian EFL gene sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-14-35

Rooting for the root of elongation factor-like protein phylogeny.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-14-35

Guanine nucleotide exchange factor independence of the G-protein eEF1A through novel mutant forms and biochemical properties

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-14-35

The origins of multicellularity: a multi-taxon genome initiative.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-14-35

Experimental Examination of EFL and MATX Eukaryotic Horizontal Gene Transfers: Coexistence of Mutually Exclusive Transcripts Predates Functional Rescue

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1471-2148-14-35

Kinetics of the Interaction of Translation Factor SelB fromEscherichia coliwith Guanosine Nucleotides and Selenocysteine Insertion Sequence RNA

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24564225

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Cercozoa comprises both EF-1α-containing and EFL-containing members

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24564225

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2148-14-35

1 reference

Dimensions Publication ID

6 August 2017

0 references

1 reference

6 August 2017

1 reference