(Q35124725)

English

Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis

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scholarly article

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Europe PubMed Central

PubMed publication ID

6 August 2017

Structure and computational analysis of a novel protein with metallopeptidase-like and circularly permuted winged-helix-turn-helix domains reveals a possible role in modified polysaccharide biosynthesis (English)

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Europe PubMed Central

PubMed publication ID

6 August 2017

circular permutation in proteins

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1 reference

based on heuristic

inferred from title

computational biology

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based on heuristic

inferred from title

6

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Europe PubMed Central

PubMed publication ID

6 August 2017

7

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Europe PubMed Central

PubMed publication ID

6 August 2017

object named as

Robert D Finn

4

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object named as

Neil D Rawlings

3

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object named as

L Aravind

8

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Alexey G. Murzin

2

object named as

Alexey G Murzin

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Penelope C Coggill

5

object named as

Penelope Coggill

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

1

object named as

Debanu Das

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

publication date

19 March 2014

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Europe PubMed Central

PubMed publication ID

6 August 2017

BMC Bioinformatics

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Europe PubMed Central

PubMed publication ID

6 August 2017

15

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Europe PubMed Central

PubMed publication ID

6 August 2017

1

1 reference

2 July 2019

75

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

copyright license

Creative Commons Attribution 2.0 Generic

19 March 2014

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April 2022 Public Data File from Crossref

copyright status

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April 2022 Public Data File from Crossref

Protein domains of unknown function are essential in bacteria

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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10.1186/1471-2105-15-75

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Europe PubMed Central

PubMed publication ID

6 August 2017

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journals/bmcbi/DasMRFCBGA14

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DBLP Dataset 2021-01-02

28 January 2021

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Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

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Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

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Semantic Scholar paper ID

c7cd5e9aa65b8f6538714d0686682f46975dd6ee

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