(Q35142867)

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Whole genome and global gene expression analyses of the model mushroom Flammulina velutipes reveal a high capacity for lignocellulose degradation.

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13 March 2020

Whole genome and global gene expression analyses of the model mushroom Flammulina velutipes reveal a high capacity for lignocellulose degradation (English)

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13 March 2020

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Flammulina velutipes

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inferred from title

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based on heuristic

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21

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13 March 2020

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Young-Jin Park

1

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13 March 2020

Jeong Hun Baek

2

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13 March 2020

Seonwook Lee

3

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13 March 2020

Changhoon Kim

4

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13 March 2020

Hwanseok Rhee

5

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13 March 2020

Hyungtae Kim

6

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13 March 2020

Jeong-Sun Seo

7

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13 March 2020

Hae-Ran Park

8

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13 March 2020

Dae-Eun Yoon

9

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13 March 2020

Jae-Young Nam

10

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13 March 2020

Hong-Il Kim

11

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13 March 2020

Jong-Guk Kim

12

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13 March 2020

Hyeokjun Yoon

13

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13 March 2020

Hee-Wan Kang

14

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13 March 2020

Jae-Yong Cho

15

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13 March 2020

Eun-Sung Song

16

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13 March 2020

Gi-Ho Sung

17

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13 March 2020

Young-Bok Yoo

18

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13 March 2020

Chang-Soo Lee

19

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13 March 2020

Byoung-Moo Lee

20

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13 March 2020

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8 April 2014

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13 March 2020

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13 March 2020

9

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13 March 2020

4

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13 March 2020

e93560

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13 March 2020

copyright license

Creative Commons Attribution 4.0 International

8 April 2014

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April 2022 Public Data File from Crossref

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0 references

Regulation of cellulase and hemicellulase gene expression in fungi

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Composition and expression of genes encoding carbohydrate-active enzymes in the straw-degrading mushroom Volvariella volvacea

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Abundance, distribution and potential impact of transposable elements in the genome of Mycosphaerella fijiensis

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Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche

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13 July 2018

The Paleozoic Origin of Enzymatic Lignin Decomposition Reconstructed from 31 Fungal Genomes

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13 July 2018

Comparative genomics of the mating-type loci of the mushroom Flammulina velutipes reveals widespread synteny and recent inversions

1 reference

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13 July 2018

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13 July 2018

Genome sequence of the model mushroom Schizophyllum commune

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13 July 2018

Insights into evolution of multicellular fungi from the assembled chromosomes of the mushroom Coprinopsis cinerea (Coprinus cinereus)

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13 July 2018

The mitochondrial genome of the wood-degrading basidiomycete Trametes cingulata

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Basidiomycete Mating Type Genes and Pheromone Signaling

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DEGseq: an R package for identifying differentially expressed genes from RNA-seq data

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13 July 2018

Genes regulated by AoXlnR, the xylanolytic and cellulolytic transcriptional regulator, in Aspergillus oryzae.

1 reference

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13 July 2018

Comparative analysis of expressed sequence tags from Flammulina velutipes at different developmental stages

1 reference

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13 July 2018

Metabolic engineering strategies for the improvement of cellulase production by Hypocrea jecorina

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13 July 2018

Electrophoretic karyotyping and construction of a bacterial artificial chromosome library of the winter mushroom Flammulina velutipes

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Fast and accurate short read alignment with Burrows-Wheeler transform

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13 July 2018

Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion

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The mitochondrial genome of the phytopathogenic basidiomycete Moniliophthora perniciosa is 109 kb in size and contains a stable integrated plasmid

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The alcohol dehydrogenases of Saccharomyces cerevisiae: a comprehensive review

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13 July 2018

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The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis

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The mitochondrial genome of the Basidiomycete fungus Pleurotus ostreatus (oyster mushroom).

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Regulation of transcription of cellulases- and hemicellulases-encoding genes in Aspergillus niger and Hypocrea jecorina (Trichoderma reesei).

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13 July 2018

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13 July 2018

Biodegradation of lignocellulosics: microbial, chemical, and enzymatic aspects of the fungal attack of lignin.

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13 July 2018

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13 July 2018

Cloning and characterization of a gene coding for a hydrophobin, Fv-hyd1, specifically expressed during fruiting body development in the basidiomycete Flammulina velutipes

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13 July 2018

A gene encoding a hydrophobin, fvh1, is specifically expressed after the induction of fruiting in the edible mushroom Flammulina velutipes

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

Isolation and analysis of xlnR, encoding a transcriptional activator co-ordinating xylanolytic expression in Aspergillus niger

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13 July 2018

Purification and characterization of a novel NADP-dependent branched-chain alcohol dehydrogenase from Saccharomyces cerevisiae

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13 July 2018

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13 July 2018

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21 January 2018

Life with 6000 genes

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13 July 2018

Molecular structure and genetic regulation of SFA, a gene responsible for resistance to formaldehyde in Saccharomyces cerevisiae, and characterization of its protein product.

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13 July 2018

Fruiting in the higher fungi.

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13 July 2018

Complete DNA sequence of yeast chromosome II

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13 July 2018

Nitrogen metabolite repression in Aspergillus nidulans

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13 July 2018

Resistance to antimycin A in yeast by amplification of ADH4 on a linear, 42 kb palindromic plasmid.

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13 July 2018

Analysis of the creA gene, a regulator of carbon catabolite repression in Aspergillus nidulans

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13 July 2018

Rate and mode differences between nuclear and mitochondrial small-subunit rRNA genes in mushrooms

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13 July 2018

Genetics of alcohol dehydrogenase in Saccharomyces cerevisiae. II. Two loci controlling synthesis of the glucose-repressible ADH II

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13 July 2018

Pleiotropic mutants ofAspergillus nidulans altered in carbon metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

13 July 2018

Ethanol production from high cellulose concentration by the basidiomycete fungus Flammulina velutipes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

The mitochondrial genome of the white-rot fungus Flammulina velutipes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Two nuclear life cycle-regulated genes encode interchangeable subunits c of mitochondrial ATP synthase in Podospora anserina

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Development of a gene transfer system for the mycelia of Flammulina velutipes Fv-1 strain.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Properties of ethanol fermentation by Flammulina velutipes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Use of whole crop sorghums as a raw material in consolidated bioprocessing bioethanol production using Flammulina velutipes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Isolation and characterization of a gene coding for chitin deacetylase specifically expressed during fruiting body development in the basidiomycete Flammulina velutipes and its expression in the yeast Pichia pastoris

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

FOLy: an integrated database for the classification and functional annotation of fungal oxidoreductases potentially involved in the degradation of lignin and related aromatic compounds.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Pileus differentiation and pileus-specific protein expression in Flammulina velutipes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Transcriptional regulation of biomass-degrading enzymes in the filamentous fungus Trichoderma reesei.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Characteristics of wine produced by mushroom fermentation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Carbon catabolite repression in Aspergillus nidulans involves deubiquitination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3979922

27 September 2018

Structure of the alkali-insoluble skeletal glucan of Lentinus edodes

1 reference

https://pubmed.ncbi.nlm.nih.gov/24714189

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Aspergillus nidulans creC gene involved in carbon catabolite repression encodes a WD40 repeat protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/24714189

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Multiple forms of alcohol dehydrogenase in Saccharomyces cerevisiae. I. Physiological control of ADH-2 and properties of ADH-2 and ADH-4

1 reference

https://pubmed.ncbi.nlm.nih.gov/24714189

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Solid-state fermentation of sugarcane bagasse with Flammulina velutipes and Trametes versicolor

1 reference

https://pubmed.ncbi.nlm.nih.gov/24714189

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular evolution of mitochondrial ribosomal DNA in the fungal genus Tricholoma: barcoding implications

1 reference

https://pubmed.ncbi.nlm.nih.gov/24714189

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Chemical and morphological characterization of the hyphal wall surface of the basidiomycete Schizophyllum Commune

1 reference

https://pubmed.ncbi.nlm.nih.gov/24714189

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1371/JOURNAL.PONE.0093560

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24714189%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

2014PLoSO...993560P

0 references

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24714189%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:24714189%20AND%20SRC:MED&resulttype=core&format=json

13 March 2020

ResearchGate publication ID

0 references

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