(Q35147681)

6 August 2017

title

The USDA barley core collection: genetic diversity, population structure, and potential for genome-wide association studies (English)

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genome-wide association study

6 August 2017

main subject

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9

Robbie Waugh

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6 August 2017

11

Gary J Muehlbauer

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6 August 2017

7

Shiaoman Chao

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6 August 2017

author name string

María Muñoz-Amatriaín

1

1 reference

6 August 2017

Alfonso Cuesta-Marcos

2

1 reference

6 August 2017

Jeffrey B Endelman

3

1 reference

6 August 2017

Jordi Comadran

4

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6 August 2017

John M Bonman

5

1 reference

6 August 2017

Harold E Bockelman

6

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6 August 2017

Joanne Russell

8

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6 August 2017

Patrick M Hayes

10

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6 August 2017

language of work or name

English

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publication date

14 April 2014

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6 August 2017

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6 August 2017

volume

9

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6 August 2017

issue

4

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6 August 2017

page(s)

e94688

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Creative Commons CC0 License

6 August 2017

copyright license

start time

14 April 2014

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April 2022 Public Data File from Crossref

copyright status

copyrighted, dedicated to the public domain by copyright holder

0 references

cites work

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1 reference

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28 July 2018

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Population structure and linkage disequilibrium in elite barley breeding germplasm from the United States

28 July 2018

1 reference

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Development of high-density genetic maps for barley and wheat using a novel two-enzyme genotyping-by-sequencing approach

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Adaptation of barley to mild winters: a role for PPDH2.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Effect of population size and unbalanced data sets on QTL detection using genome-wide association mapping in barley breeding germplasm

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Population genetics of genomics-based crop improvement methods

28 July 2018

1 reference

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Genome-wide SNPs and re-sequencing of growth habit and inflorescence genes in barley: implications for association mapping in germplasm arrays varying in size and structure

28 July 2018

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Mixed linear model approach adapted for genome-wide association studies

28 July 2018

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Effects of ascertainment bias and marker number on estimations of barley diversity from high-throughput SNP genotype data

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Breeding technologies to increase crop production in a changing world.

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Development and implementation of high-throughput SNP genotyping in barley

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

The emergence of whole genome association scans in barley

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

The stem rust resistance gene Rpg5 encodes a protein with nucleotide-binding-site, leucine-rich, and protein kinase domains

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Barley grain with adhering hulls is controlled by an ERF family transcription factor gene regulating a lipid biosynthesis pathway

28 July 2018

1 reference

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TASSEL: software for association mapping of complex traits in diverse samples

28 July 2018

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Extreme population-dependent linkage disequilibrium detected in an inbreeding plant species, Hordeum vulgare

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Positional cloning of the wheat vernalization gene VRN1

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Wild barley: a source of genes for crop improvement in the 21st century?

28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

On the origin and domestication history of Barley (Hordeum vulgare).

28 July 2018

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Seed banks and molecular maps: unlocking genetic potential from the wild

28 July 2018

1 reference

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28 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Association mapping of salt tolerance in barley (Hordeum vulgare L.).

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Consumption of a high β-glucan barley flour improves glucose control and fatty liver and increases muscle acylcarnitines in the Zucker diabetic fatty rat.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Natural variation in a homolog of Antirrhinum CENTRORADIALIS contributed to spring growth habit and environmental adaptation in cultivated barley.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Marker-trait associations in Virginia Tech winter barley identified using genome-wide mapping

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Genomics of gene banks: A case study in rice

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

NGS technologies for analyzing germplasm diversity in genebanks.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

INTERMEDIUM-C, a modifier of lateral spikelet fertility in barley, is an ortholog of the maize domestication gene TEOSINTE BRANCHED 1.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

β-glucan from barley and its lipid-lowering capacity: a meta-analysis of randomized, controlled trials

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

RFLP mapping of five major genes and eight quantitative trait loci controlling flowering time in a winter x spring barley (Hordeum vulgare L.) cross

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Efficient control of population structure in model organism association mapping

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Cereal breeding takes a walk on the wild side

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Haplotype analysis of vernalization loci in European barley germplasm reveals novel VRN-H1 alleles and a predominant winter VRN-H1/VRN-H2 multi-locus haplotype

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

The FLOWERING LOCUS T-like gene family in barley (Hordeum vulgare).

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

The Horn of Africa as a centre of barley diversification and a potential domestication site.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Six-rowed barley originated from a mutation in a homeodomain-leucine zipper I-class homeobox gene

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

The structure of linkage disequilibrium around a selective sweep

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

The pseudo-response regulator Ppd-H1 provides adaptation to photoperiod in barley.

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Inference of population structure using multilocus genotype data

27 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3986206

Plant breeding and climate changes

27 September 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094688

Status and Prospects of Association Mapping in Plants

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094688

Accessing genetic diversity for crop improvement

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094688

Crops that feed the world 4. Barley: a resilient crop? Strengths and weaknesses in the context of food security

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094688

A bacterial artificial chromosome library for barley ( Hordeum vulgare L.) and the identification of clones containing putative resistance genes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094688

An Improved Consensus Linkage Map of Barley Based on Flow-Sorted Chromosomes and Single Nucleotide Polymorphism Markers

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0094688

Genome-wide SNP discovery and linkage analysis in barley based on genes responsive to abiotic stress

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24732668

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Low-temperature and daylength cues are integrated to regulate FLOWERING LOCUS T in barley

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24732668

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0094688

1 reference

6 August 2017

0 references

1 reference

6 August 2017

1 reference