(Q35155724)

English

B cell variable genes have evolved their codon usage to focus the targeted patterns of somatic mutation on the complementarity determining regions

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

B cell variable genes have evolved their codon usage to focus the targeted patterns of somatic mutation on the complementarity determining regions (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

object named as

Uri Hershberg

2

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author name string

Jasmine Saini

1

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

language of work or name

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inferred from title

publication date

6 February 2015

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Molecular Immunology

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Europe PubMed Central

PubMed publication ID

6 August 2017

65

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

157-167

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Reconstructing a B-Cell Clonal Lineage. II. Mutation, Selection, and Affinity Maturation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Models of somatic hypermutation targeting and substitution based on synonymous mutations from high-throughput immunoglobulin sequencing data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Germline Amino Acid Diversity in B Cell Receptors is a Good Predictor of Somatic Selection Pressures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Ensembl Genomes 2013: scaling up access to genome-wide data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Age-Related Changes in Human Peripheral Blood IGH Repertoire Following Vaccination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Synonymous but not the same: the causes and consequences of codon bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

High-throughput immunoglobulin repertoire analysis distinguishes between human IgM memory and switched memory B-cell populations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Selection on Codon Bias

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Differences in potential for amino acid change after mutation reveals distinct strategies for kappa and lambda light-chain variation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Antibody repertoire development in the sheep

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Antigen-specific memory B cell development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

The war between the malaria parasite and the immune system: immunity, immunoregulation and immunopathology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

IMGT unique numbering for immunoglobulin and T cell receptor variable domains and Ig superfamily V-like domains

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Genetic plasticity of V genes under somatic hypermutation: statistical analyses using a new resampling-based methodology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Codon usage tabulated from international DNA sequence databases: status for the year 2000

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Predicting regional mutability in antibody V genes based solely on di- and trinucleotide sequence composition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Innate and acquired humoral immunities to influenza virus are mediated by distinct arms of the immune system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Rearrangement/hypermutation/gene conversion: when, where and why?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Cell adhesion molecules 1: immunoglobulin superfamily

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Passenger transgenes reveal intrinsic specificity of the antibody hypermutation mechanism: clustering, polarity, and specific hot spots

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Discriminating intrinsic and antigen-selected mutational hotspots in immunoglobulin V genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

The immunoglobulin fold. Structural classification, sequence patterns and common core

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

The CDR1 sequences of a major proportion of human germline Ig VH genes are inherently susceptible to amino acid replacement

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Somatic hypermutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

An immunoglobulin heavy chain variable region gene is generated from three segments of DNA: VH, D and JH.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Somatic generation of antibody diversity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

An analysis of the sequences of the variable regions of Bence Jones proteins and myeloma light chains and their implications for antibody complementarity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

The immunoglobulin superfamily--domains for cell surface recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

Somatic generation of diversity in a mammalian primary lymphoid organ: the sheep ileal Peyer's patches

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

The preferential codon usages in variable and constant regions of immunoglobulin genes are quite distinct from each other

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

13 July 2018

IgE sequences in individuals living in an area of endemic parasitism show little mutational evidence of antigen selection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

27 September 2018

Enhanced evolvability in immunoglobulin V genes under somatic hypermutation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

27 September 2018

Codon bias and plasticity in immunoglobulins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4352345

27 September 2018

Structural determinants in the sequences of immunoglobulin variable domain

1 reference

https://pubmed.ncbi.nlm.nih.gov/25660968

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Codon bias targets mutation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/25660968

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evolution of Ig DNA sequence to target specific base positions within codons for somatic hypermutation

1 reference

https://pubmed.ncbi.nlm.nih.gov/25660968

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Hypermutation generating the sheep immunoglobulin repertoire is an antigen-independent process

1 reference

https://pubmed.ncbi.nlm.nih.gov/25660968

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Immunoglobulin Fold

1 reference

https://pubmed.ncbi.nlm.nih.gov/25660968

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1016/J.MOLIMM.2015.01.001

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

0 references

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