(Q35166108)

English

Large-scale phylogenomic analysis reveals the phylogenetic position of the problematic taxon Protocruzia and unravels the deep phylogenetic affinities of the ciliate lineages

scientific article

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Large-scale phylogenomic analysis reveals the phylogenetic position of the problematic taxon Protocruzia and unravels the deep phylogenetic affinities of the ciliate lineages (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

1 reference

based on heuristic

inferred from title

1 reference

based on heuristic

inferred from title

Vittorio Boscaro

3

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

11

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Martin Kolísko

object named as

M Kolisko

2

0 references

Sandra Pucciarelli

object named as

S Pucciarelli

12

0 references

Cristina Miceli

object named as

C Miceli

8

0 references

15

object named as

D H Lynn

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

author name string

E Gentekaki

1

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

K J Bright

4

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

F Dini

5

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

G Di Giuseppe

6

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

Y Gong

7

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

L Modeo

9

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

R E Molestina

10

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

A J Roger

13

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

S L Strom

14

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

publication date

6 May 2014

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

number of pages

7

1 reference

based on heuristic

inferred from page(s)

Molecular Phylogenetics and Evolution

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

78

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

36-42

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ProtTest: selection of best-fit models of protein evolution

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Generation and analysis of expressed sequence tags from the ciliate protozoan parasite Ichthyophthirius multifiliis

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

The Revised Classification of Eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Alveolate phylogeny inferred using concatenated ribosomal proteins

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Origin and evolution of the slime molds (Mycetozoa)

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

The analysis of 100 genes supports the grouping of three highly divergent amoebae: Dictyostelium, Entamoeba, and Mastigamoeba

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Protein coding gene trees in ciliates: comparison with rRNA-based phylogenies.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Evolution of histone H4 and H3 genes in different ciliate lineages

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic relationships of the Nassulida within the phylum Ciliophora inferred from the complete small subunit rRNA gene sequences of Furgasonia blochmanni, Obertrumia georgiana, and Pseudomicrothorax dubius.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic relationships within the class Spirotrichea (Ciliophora) inferred from small subunit rRNA gene sequences.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Aggregative multicellularity evolved independently in the eukaryotic supergroup Rhizaria

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenomics demonstrates that breviate flagellates are related to opisthokonts and apusomonads

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

New insights into the phylogeny of eukaryotes based on ciliate Hsp70 sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenomics reshuffles the eukaryotic supergroups

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Large-scale phylogenomic analyses reveal that two enigmatic protist lineages, telonemia and centroheliozoa, are related to photosynthetic chromalveolates

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Evolution of Rhizaria: new insights from phylogenomic analysis of uncultivated protists

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

The evolutionary history of haptophytes and cryptophytes: phylogenomic evidence for separate origins

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenomics of the intracellular parasite Mikrocytos mackini reveals evidence for a mitosome in rhizaria

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Evidence for an independent radiation of endosymbiotic litostome ciliates within Australian marsupial herbivores.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic study of Class Armophorea (Alveolata, Ciliophora) based on 18S-rDNA data

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

The use of small subunit rRNA sequences to unravel the relationships between anaerobic ciliates and their methanogen endosymbionts

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Multiple origins of anaerobic ciliates with hydrogenosomes within the radiation of aerobic ciliates

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Small subunit rRNA phylogenies show that the class nassophorea is not monophyletic (Phylum Ciliophora).

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic relationships of Blepharisma americanum and Colpoda inflata within the phylum ciliophora inferred from complete small subunit rRNA gene sequences.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Insights into the evolution of nuclear dualism in the ciliates revealed by phylogenetic analysis of rRNA sequences.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenomic analyses support the monophyly of Excavata and resolve relationships among eukaryotic "supergroups"

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic relationships among karyorelictids and heterotrichs inferred from small subunit rRNA sequences: resolution at the base of the ciliate tree.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Parallelization of the MAFFT multiple sequence alignment program

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Dramatic diversity of ciliate histone H4 genes revealed by comparisons of patterns of substitutions and paralog divergences among eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

PhyloBayes 3: a Bayesian software package for phylogenetic reconstruction and molecular dating

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

An improved general amino acid replacement matrix

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Morphostasis in alveolate evolution

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Protocruzia, a highly ambiguous ciliate (Protozoa; Ciliophora): very likely an ancestral form for Heterotrichea, Colpodea or Spirotrichea? With reevaluation of its evolutionary position based on multigene analyses

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

A molecular and ultrastructural description of Spathidiopsis buddenbrocki and the phylogenetic position of the family Placidae (Ciliophora).

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

My Journey in Ciliate Systematics

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Assessment of phylogenetic relationships among ciliated protists using partial ribosomal RNA sequences derived from reverse transcripts

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic position of Licnophora, Lechriopyla, and Schizocaryum, three unusual ciliates (phylum Ciliophora) endosymbiotic in echinoderms (phylum Echinodermata).

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic relationships of orders within the class colpodea (Phylum ciliophora) inferred from small subunit rRNA gene sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Variation in macronuclear genome content of three ciliates with extensive chromosomal fragmentation: a preliminary analysis

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Broadly sampled multigene analyses yield a well-resolved eukaryotic tree of life

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Early-branching or fast-evolving eukaryotes? An answer based on slowly evolving positions

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

FastTree: computing large minimum evolution trees with profiles instead of a distance matrix

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Macronuclear genome structure of the ciliate Nyctotherus ovalis: single-gene chromosomes and tiny introns

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Widespread distribution of extensive chromosomal fragmentation in ciliates

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Mitosis-like macronuclear division in a ciliate

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

A new macrosystem for the phylum ciliophora doflein, 1901

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Molecular Phylogeny of Phyllopharyngean Ciliates and their Group I Introns

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Primary structure of the Paramecium tetraurelia small-subunit rRNA coding region: phylogenetic relationships within the Ciliophora.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Morphological Investigations on Some Free Living Ciliates (Protozoa, Ciliophora) from China Sea with Description of a New Hypotrichous Genus, Hemigastrostyla nov. gen.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Phylogenetic relationships between prostome and colpodean ciliates tested by small subunit rRNA sequences

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Novel eukaryotes from the permanently anoxic Cariaco Basin (Caribbean Sea).

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Estimation of rates-across-sites distributions in phylogenetic substitution models

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

The Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomes

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Molecular and morphological evidence for a sister group relationship of the classes Armophorea and Litostomatea (Ciliophora, Intramacronucleata, Lamellicorticata infraphyl. nov.), with an account on basal litostomateans.

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Collodictyon--an ancient lineage in the tree of eukaryotes

1 reference

https://api.crossref.org/works/10.1016%2FJ.YMPEV.2014.04.020

7 January 2021

Identifiers

10.1016/J.YMPEV.2014.04.020

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q35166108&oldid=1944539402"