(Q35198574)

7 August 2017

title

Coalescent histories on phylogenetic networks and detection of hybridization despite incomplete lineage sorting (English)

1 reference

7 August 2017

1 reference

4

Luay Nakhleh

1 reference

7 August 2017

Yun Yu

1

1 reference

7 August 2017

Cuong Than

series ordinal

2

1 reference

7 August 2017

James H Degnan

series ordinal

3

1 reference

7 August 2017

publication date

19 January 2011

1 reference

7 August 2017

number of pages

12

1 reference

inferred from page(s)

published in

Systematic Biology

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7 August 2017

volume

60

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7 August 2017

issue

2

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7 August 2017

page(s)

138-149

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Unifying vertical and nonvertical evolution: a stochastic ARG-based framework

7 August 2017

cites work

1 reference

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13 July 2018

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Species tree inference by minimizing deep coalescences

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Coalescent methods for estimating phylogenetic trees

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Gene tree discordance, phylogenetic inference and the multispecies coalescent

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Is a new and general theory of molecular systematics emerging?

13 July 2018

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The Apicomplexan whole-genome phylogeny: an analysis of incongruence among gene trees

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Reconstruction of the genome origins and evolution of the hybrid lager yeast Saccharomyces pastorianus

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Phylogenetic inference using whole genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Reconstructing patterns of reticulate evolution in plants

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Using supernetworks to distinguish hybridization from lineage-sorting

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Efficient inference of bacterial strain trees from genome-scale multilocus data

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Molecular characterization of new natural hybrids of Saccharomyces cerevisiae and S. kudriavzevii in brewing.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Confounding factors in HGT detection: statistical error, coalescent effects, and multiple solutions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Species trees from gene trees: reconstructing Bayesian posterior distributions of a species phylogeny using estimated gene tree distributions

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

High-resolution species trees without concatenation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Widespread Discordance of Gene Trees with Species Tree in Drosophila: Evidence for Incomplete Lineage Sorting

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Hybridization as an invasion of the genome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Inferring phylogeny despite incomplete lineage sorting

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Genome-scale approaches to resolving incongruence in molecular phylogenies

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

On the probability of Neanderthal ancestry

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Line-of-descent and genealogical processes, and their applications in population genetics models.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Species trees from highly incongruent gene trees in rice.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

A statistical approach for distinguishing hybridization and incomplete lineage sorting.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

STEM: species tree estimation using maximum likelihood for gene trees under coalescence.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Detecting hybrid speciation in the presence of incomplete lineage sorting using gene tree incongruence: a model.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Inferring phylogenetic networks by the maximum parsimony criterion: a case study

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Gene tree distributions under the coalescent process

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3167682

Reconstructing patterns of reticulate evolution in plants

26 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FSYSBIO%2FSYQ084

Enological characterization of natural hybrids from Saccharomyces cerevisiae and S. kudriavzevii

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21248369

12 December 2020

inferred from PubMed ID database lookup

Evolutionary relationships among Pinus (Pinaceae) subsections inferred from multiple low-copy nuclear loci

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21248369

12 December 2020

inferred from PubMed ID database lookup

Identifying hybridization events in the presence of coalescence via model selection

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21248369

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/SYSBIO/SYQ084

1 reference

7 August 2017

1 reference

7 August 2017

1 reference