(Q35207938)

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Adeno-associated virus type 2 wild-type and vector-mediated genomic integration profiles of human diploid fibroblasts analyzed by third-generation PacBio DNA sequencing

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Europe PubMed Central

PubMed publication ID

7 August 2017

Adeno-associated virus type 2 wild-type and vector-mediated genomic integration profiles of human diploid fibroblasts analyzed by third-generation PacBio DNA sequencing (English)

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

vector-borne disease

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based on heuristic

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Andreas Gogol-Döring

2

object named as

Andreas Gogol-Döring

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Europe PubMed Central

PubMed publication ID

7 August 2017

author name string

Daniela Hüser

1

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Europe PubMed Central

PubMed publication ID

7 August 2017

Wei Chen

3

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Europe PubMed Central

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7 August 2017

Regine Heilbronn

4

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7 August 2017

language of work or name

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publication date

16 July 2014

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Europe PubMed Central

PubMed publication ID

7 August 2017

Journal of Virology

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Europe PubMed Central

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7 August 2017

88

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Europe PubMed Central

PubMed publication ID

7 August 2017

19

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Europe PubMed Central

PubMed publication ID

7 August 2017

11253-11263

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

Adeno-associated virus type 2 preferentially integrates single genome copies with defined breakpoints

1 reference

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OneBac: platform for scalable and high-titer production of adeno-associated virus serotype 1-12 vectors for gene therapy

1 reference

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13 July 2018

A largely random AAV integration profile after LPLD gene therapy

1 reference

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13 July 2018

High-throughput sequencing reveals principles of adeno-associated virus serotype 2 integration

1 reference

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13 July 2018

The genomic and transcriptomic landscape of a HeLa cell line

1 reference

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13 July 2018

An integrated encyclopedia of DNA elements in the human genome

1 reference

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Fast gapped-read alignment with Bowtie 2

1 reference

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13 July 2018

Integration preferences of wildtype AAV-2 for consensus rep-binding sites at numerous loci in the human genome

1 reference

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Efficient targeting of expressed and silent genes in human ESCs and iPSCs using zinc-finger nucleases

1 reference

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13 July 2018

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

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13 July 2018

Combinatorial patterns of histone acetylations and methylations in the human genome

1 reference

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13 July 2018

Site-specific, Rep-mediated integration of the intact beta-globin locus in the human erythroleukaemic cell line K562.

1 reference

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High-resolution profiling of histone methylations in the human genome

1 reference

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13 July 2018

A helper-dependent capsid-modified adenovirus vector expressing adeno-associated virus rep78 mediates site-specific integration of a 27-kilobase transgene cassette

1 reference

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13 July 2018

How adeno-associated virus Rep78 protein arrests cells completely in S phase

1 reference

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13 July 2018

Large-scale analysis of adeno-associated virus vector integration sites in normal human cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Integration of adeno-associated virus (AAV) and recombinant AAV vectors

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Site-specific integration of functional transgenes into the human genome by adeno/AAV hybrid vectors.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Packaging of human chromosome 19-specific adeno-associated virus (AAV) integration sites in AAV virions during AAV wild-type and recombinant AAV vector production.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Kinetics and frequency of adeno-associated virus site-specific integration into human chromosome 19 monitored by quantitative real-time PCR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Characteristics of the adeno-associated virus preintegration site in human chromosome 19: open chromatin conformation and transcription-competent environment

1 reference

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13 July 2018

DNA sequence motifs which direct adeno-associated virus site-specific integration in a model system

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Comprehensive and definitive molecular cytogenetic characterization of HeLa cells by spectral karyotyping

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

High mobility group chromosomal protein 1 binds to the adeno-associated virus replication protein (Rep) and promotes Rep-mediated site-specific cleavage of DNA, ATPase activity and transcriptional repression

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

The recombination signals for adeno-associated virus site-specific integration

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

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Features of the adeno-associated virus origin involved in substrate recognition by the viral Rep protein

1 reference

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Identification of linear DNA sequences that specifically bind the adeno-associated virus Rep protein.

1 reference

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13 July 2018

Adeno-associated virus (AAV) Rep proteins mediate complex formation between AAV DNA and its integration site in human DNA

1 reference

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13 July 2018

Determination of adeno-associated virus Rep68 and Rep78 binding sites by random sequence oligonucleotide selection

1 reference

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A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

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The adeno-associated virus rep gene suppresses herpes simplex virus-induced DNA amplification

1 reference

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13 July 2018

The AAV origin binding protein Rep68 is an ATP-dependent site-specific endonuclease with DNA helicase activity

1 reference

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Site-specific integration by adeno-associated virus

1 reference

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A subset of herpes simplex virus replication genes provides helper functions for productive adeno-associated virus replication

1 reference

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13 July 2018

Targeted integration of adeno-associated virus (AAV) into human chromosome 19

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

13 July 2018

Characterization of a preferred site on human chromosome 19q for integration of adeno-associated virus DNA by non-homologous recombination

1 reference

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Characterization of a bipartite recombinant adeno-associated viral vector for site-specific integration

1 reference

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26 September 2018

Adeno-associated virus integrates site-specifically into human chromosome 19 in either orientation and with equal kinetics and frequency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4178796

26 September 2018

Identifiers

10.1128/JVI.01356-14

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

7 August 2017

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