(Q35208274)

7 August 2017

title

AMIGene: Annotation of MIcrobial Genes (English)

1 reference

7 August 2017

5

Claudine Médigue

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author name string

Stéphanie Bocs

1

1 reference

7 August 2017

Stéphane Cruveiller

2

1 reference

7 August 2017

David Vallenet

3

1 reference

7 August 2017

Grégory Nuel

4

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7 August 2017

language of work or name

English

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publication date

1 July 2003

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7 August 2017

published in

Nucleic Acids Research

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7 August 2017

volume

31

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7 August 2017

issue

13

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7 August 2017

page(s)

3723-3726

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Integration of data and methods for genome analysis

7 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Use and misuse of correspondence analysis in codon usage studies

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Re-annotation of the genome sequence of Mycobacterium tuberculosis H37Rv

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

The secE gene of Helicobacter pylori

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Re-annotation of genome microbial coding-sequences: finding new genes and inaccurately annotated genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

SubtiList: the reference database for the Bacillus subtilis genome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

EcoGene: a genome sequence database for Escherichia coli K-12.

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Detecting and analyzing DNA sequencing errors: toward a higher quality of the Bacillus subtilis genome sequence

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Codon usage and lateral gene transfer in Bacillus subtilis

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Replicational and transcriptional selection on codon usage in Borrelia burgdorferi

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Microbial gene identification using interpolated Markov models

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Detection of new genes in a bacterial genome using Markov models for three gene classes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Evidence for horizontal gene transfer in Escherichia coli speciation

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Limitations of compositional approach to identifying horizontally transferred genes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Codon bias and base composition are poor indicators of horizontally transferred genes.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Imagene: an integrated computer environment for sequence annotation and analysis

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=168996

Universal replication biases in bacteria

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/12824403

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/NAR/GKG590

1 reference

7 August 2017

DBLP publication ID

journals/nar/BocsCVNM03

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

7 August 2017

1 reference