(Q35210563)

7 August 2017

title

Metabolic pathways for the whole community (English)

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7 August 2017

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5

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7 August 2017

Niels W Hanson

1

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Steven James Hallam

series ordinal

6

object named as

Steven J Hallam

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7 August 2017

Kishori M Konwar

2

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7 August 2017

Alyse K Hawley

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3

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7 August 2017

Tomer Altman

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4

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7 August 2017

language of work or name

English

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publication date

22 July 2014

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7 August 2017

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7 August 2017

volume

15

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7 August 2017

page(s)

619

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describes a project that uses

7 August 2017

1 reference

10 June 2022

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/efetch.fcgi?db=pmc&rettype=xml&id=4137073

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13 July 2018

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The challenge of constructing, classifying, and representing metabolic pathways

13 July 2018

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A systematic comparison of the MetaCyc and KEGG pathway databases

13 July 2018

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Public good dynamics drive evolution of iron acquisition strategies in natural bacterioplankton populations

13 July 2018

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Ecological interactions drive evolutionary loss of traits

13 July 2018

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Metabolic reconstruction for metagenomic data and its application to the human microbiome

13 July 2018

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13 July 2018

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Species interactions alter evolutionary responses to a novel environment

13 July 2018

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Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset

13 July 2018

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13 July 2018

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13 July 2018

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Construction and completion of flux balance models from pathway databases

13 July 2018

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13 July 2018

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An interdependent metabolic patchwork in the nested symbiosis of mealybugs

13 July 2018

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Community transcriptomics reveals universal patterns of protein sequence conservation in natural microbial communities

13 July 2018

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13 July 2018

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Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean

13 July 2018

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Metagenomics: Facts and Artifacts, and Computational Challenges*

13 July 2018

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A Nitrospira metagenome illuminates the physiology and evolution of globally important nitrite-oxidizing bacteria

13 July 2018

1 reference

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Machine learning methods for metabolic pathway prediction

13 July 2018

1 reference

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13 July 2018

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13 July 2018

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13 July 2018

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13 July 2018

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MEGAN analysis of metagenomic data

13 July 2018

1 reference

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13 July 2018

1 reference

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Deciphering the evolution and metabolism of an anammox bacterium from a community genome

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

Community genomics among stratified microbial assemblages in the ocean's interior

13 July 2018

1 reference

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MetaCyc: a multiorganism database of metabolic pathways and enzymes

13 July 2018

1 reference

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Expansion of the BioCyc collection of pathway/genome databases to 160 genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

Metagenomics: application of genomics to uncultured microorganisms

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

The Pathway Tools software

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

The COG database: new developments in phylogenetic classification of proteins from complete genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

KEGG: kyoto encyclopedia of genes and genomes

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

Cell biology and molecular basis of denitrification

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

A new obligately chemolithoautotrophic, nitrite-oxidizing bacterium, Nitrospira moscoviensis sp. nov. and its phylogenetic relationship

13 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4137073

13 July 2018

Identifiers

DOI

10.1186/1471-2164-15-619

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7 August 2017

1 reference

7 August 2017

1 reference