(Q35354334)

7 August 2017

title

Computational prediction of candidate proteins for S-nitrosylation in Arabidopsis thaliana (English)

1 reference

7 August 2017

0 references

computational biology

1 reference

Mounira Chaki

1

0 references

Manuel Spannagl

series ordinal

3

object named as

Manuel Spannagl

1 reference

7 August 2017

Izabella Kovacs

2

1 reference

7 August 2017

Christian Lindermayr

series ordinal

4

1 reference

7 August 2017

language of work or name

English

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publication date

21 October 2014

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7 August 2017

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7 August 2017

volume

9

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7 August 2017

issue

10

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7 August 2017

page(s)

e110232

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Creative Commons Attribution 4.0 International

7 August 2017

copyright license

start time

21 October 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Dual regulation of cytosolic ascorbate peroxidase (APX) by tyrosine nitration and S-nitrosylation.

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12 July 2018

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Characterization and Prediction of Protein Phosphorylation Hotspots in Arabidopsis thaliana

12 July 2018

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Looking deep inside: detection of low-abundance proteins in leaf extracts of Arabidopsis and phloem exudates of pumpkin

12 July 2018

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S-Nitrosylated proteins in pea (Pisum sativum L.) leaf peroxisomes: changes under abiotic stress.

12 July 2018

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Discrete redox signaling pathways regulate photosynthetic light-harvesting and chloroplast gene transcription

12 July 2018

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The role of nitric oxide in the germination of plant seeds and pollen.

12 July 2018

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SNOSite: exploiting maximal dependence decomposition to identify cysteine S-nitrosylation with substrate site specificity

12 July 2018

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Proteomic analysis of defense response of wildtype Arabidopsis thaliana and plants with impaired NO- homeostasis

12 July 2018

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12 July 2018

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Ribosomal protein L27a is required for growth and patterning in Arabidopsis thaliana

12 July 2018

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Mechanical wounding induces a nitrosative stress by down-regulation of GSNO reductase and an increase in S-nitrosothiols in sunflower (Helianthus annuus) seedlings.

12 July 2018

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S-alkylating labeling strategy for site-specific identification of the s-nitrosoproteome

12 July 2018

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Structural profiling of endogenous S-nitrosocysteine residues reveals unique features that accommodate diverse mechanisms for protein S-nitrosylation.

12 July 2018

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Site-specific proteomics approach for study protein S-nitrosylation

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

GPS-SNO: computational prediction of protein S-nitrosylation sites with a modified GPS algorithm

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

The redox switch: dynamic regulation of protein function by cysteine modifications.

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Structural analysis of cysteine S-nitrosylation: a modified acid-based motif and the emerging role of trans-nitrosylation

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Differential modulation of S-nitrosoproteome of Brassica juncea by low temperature: change in S-nitrosylation of Rubisco is responsible for the inactivation of its carboxylase activity

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Nitric oxide functions as a positive regulator of root hair development

12 July 2018

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S-nitrosylation of Drp1 mediates beta-amyloid-related mitochondrial fission and neuronal injury

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Involvement of reactive nitrogen and oxygen species (RNS and ROS) in sunflower-mildew interaction.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

S-nitrosylation of surfactant protein-D controls inflammatory function

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Cysteine S-Nitrosylation Protects Protein-tyrosine Phosphatase 1B against Oxidation-induced Permanent Inactivation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

CSS-Palm 2.0: an updated software for palmitoylation sites prediction

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Plant immunity requires conformational changes [corrected] of NPR1 via S-nitrosylation and thioredoxins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

GPS 2.0, a tool to predict kinase-specific phosphorylation sites in hierarchy

12 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Three PIGGYBACK genes that specifically influence leaf patterning encode ribosomal proteins

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

S-nitrosylating agents: a novel class of compounds that increase cystic fibrosis transmembrane conductance regulator expression and maturation in epithelial cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Identification of S-nitrosylation motifs by site-specific mapping of the S-nitrosocysteine proteome in human vascular smooth muscle cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

SNOSID, a proteomic method for identification of cysteine S-nitrosylation sites in complex protein mixtures

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Chloroplasts as source and target of cellular redox regulation: a discussion on chloroplast redox signals in the context of plant physiology

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Protein S-nitrosylation: purview and parameters

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

In situ detection and visualization of S-nitrosylated proteins following chemical derivatization: identification of Ran GTPase as a target for S-nitrosylation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Identification of genes required for embryo development in Arabidopsis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Proteomic analysis of S-nitrosylated proteins in mesangial cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Nitrosylation. the prototypic redox-based signaling mechanism.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

S-Nitrosylation of mitochondrial caspases

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Export by red blood cells of nitric oxide bioactivity

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Defense gene induction in tobacco by nitric oxide, cyclic GMP, and cyclic ADP-ribose

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Nitric oxide functions as a signal in plant disease resistance

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Nitric oxide and abscisic acid cross talk in guard cells.

12 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Metabolism of reactive nitrogen species in pea plants under abiotic stress conditions

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Argininosuccinate synthetase is reversibly inactivated by S-nitrosylation in vitro and in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Proteomic identification of S-nitrosylated proteins in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

S-nitrosylated proteins of a medicinal CAM plant Kalanchoe pinnata- ribulose-1,5-bisphosphate carboxylase/oxygenase activity targeted for inhibition

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Regulation of plant glycine decarboxylase by s-nitrosylation and glutathionylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Redox regulation of the NPR1-TGA1 system of Arabidopsis thaliana by nitric oxide

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Studying the S-nitrosylation of model peptides and eNOS protein by mass spectrometry

21 January 2018

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https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Proteomics investigation of endogenous S-nitrosylation in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Proteomics reveals the overlapping roles of hydrogen peroxide and nitric oxide in the acclimation of citrus plants to salinity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Systematic study of protein sumoylation: Development of a site-specific predictor of SUMOsp 2.0

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Preconditioning results in S-nitrosylation of proteins involved in regulation of mitochondrial energetics and calcium transport

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Proteomic analysis of S-nitrosylated proteins in potato plant

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

AtGSNOR1 function is required for multiple developmental programs in Arabidopsis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Chloroplast functionality has a positive effect on nitric oxide level in soybean cotyledons

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Oxidative and nitrosative-based signaling and associated post-translational modifications orchestrate the acclimation of citrus plants to salinity stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Ribosomal proteins promote leaf adaxial identity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Coordination of cell proliferation and cell expansion mediated by ribosome-related processes in the leaves of Arabidopsis thaliana.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Plant L10 ribosomal proteins have different roles during development and translation under ultraviolet-B stress

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Auxin-mediated ribosomal biogenesis regulates vacuolar trafficking in Arabidopsis

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Metacaspase activity of Arabidopsis thaliana is regulated by S-nitrosylation of a critical cysteine residue.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Differential inhibition of Arabidopsis methionine adenosyltransferases by protein S-nitrosylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

S-nitrosylation of peroxiredoxin II E promotes peroxynitrite-mediated tyrosine nitration.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Regulation of plant cytosolic glyceraldehyde 3-phosphate dehydrogenase isoforms by thiol modifications

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

S-nitrosylation of AtSABP3 antagonizes the expression of plant immunity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

S-nitrosylation of NADPH oxidase regulates cell death in plant immunity.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Regulation of plant cytosolic aldolase functions by redox-modifications.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

Nitric oxide influences auxin signaling through S-nitrosylation of the Arabidopsis TRANSPORT INHIBITOR RESPONSE 1 auxin receptor

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

S-nitrosylation influences the structure and DNA binding activity of AtMYB30 transcription factor from Arabidopsis thaliana

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0110232

The biotin switch method for the detection of S-nitrosylated proteins

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4204854

Nitric oxide inhibits the ATPase activity of the chaperone-like AAA+ ATPase CDC48, a target for S-nitrosylation in cryptogein signalling in tobacco cells

26 September 2018

1 reference

12 December 2020

Nitric oxide and protein S-nitrosylation are integral to hydrogen peroxide-induced leaf cell death in rice

1 reference

12 December 2020

Proteomic analysis of S-nitrosylated proteins inArabidopsis thaliana undergoing hypersensitive response

1 reference

12 December 2020

Salinity-induced changes in S-nitrosylation of pea mitochondrial proteins

1 reference

12 December 2020

Arabidopsis nonsymbiotic hemoglobin AHb1 modulates nitric oxide bioactivity

1 reference

12 December 2020

10.1371/JOURNAL.PONE.0110232

Identifiers

DOI

1 reference

release_7qtajjkmnbbvrhgaimucpy2ojy

7 August 2017

0 references

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/7qtajjkmnbbvrhgaimucpy2ojy

24 November 2022

mapped directly with Wikidata item

PMC publication ID

4204854

1 reference

7 August 2017

1 reference