(Q35371210)

8 August 2017

title

Distinct soil microbial diversity under long-term organic and conventional farming (English)

1 reference

8 August 2017

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1 reference

1 reference

Martin Hartmann

1

0 references

Franco Widmer

object named as

Franco Widmer

5

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author name string

Beat Frey

2

1 reference

8 August 2017

Jochen Mayer

3

1 reference

8 August 2017

Paul Mäder

4

1 reference

8 August 2017

publication date

31 October 2014

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8 August 2017

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8 August 2017

volume

9

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8 August 2017

issue

5

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8 August 2017

page(s)

1177-1194

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Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported

8 August 2017

copyright license

start time

31 October 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

cites work

Resistance and resilience of the forest soil microbiome to logging-associated compaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Identification of thermophilic bacterial strains producing thermotolerant hydrolytic enzymes from manure compost

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Pyrosequencing reveals the influence of organic and conventional farming systems on bacterial communities

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Significant and persistent impact of timber harvesting on soil microbial communities in Northern coniferous forests

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Towards next-generation biodiversity assessment using DNA metabarcoding

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

UCHIME improves sensitivity and speed of chimera detection

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Removing noise from pyrosequenced amplicons

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Clustering 16S rRNA for OTU prediction: a method of unsupervised Bayesian clustering

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

V-Xtractor: an open-source, high-throughput software tool to identify and extract hypervariable regions of small subunit (16S/18S) ribosomal RNA gene sequences

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

DNA barcoding of arbuscular mycorrhizal fungi

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Soil biota community structure and abundance under agricultural intensification and extensification

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Associations between species and groups of sites: indices and statistical inference.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Accurate determination of microbial diversity from 454 pyrosequencing data

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Pyrosequencing-based assessment of soil pH as a predictor of soil bacterial community structure at the continental scale

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Three genomes from the phylum Acidobacteria provide insight into the lifestyles of these microorganisms in soils

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

A comprehensive survey of soil acidobacterial diversity using pyrosequencing and clone library analyses

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Toward an ecological classification of soil bacteria.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Community structure analyses are more sensitive to differences in soil bacterial communities than anonymous diversity indices

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Greengenes, a chimera-checked 16S rRNA gene database and workbench compatible with ARB

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Distance-based tests for homogeneity of multivariate dispersions

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Bacterial community structure and diversity in a century-old manure-treated agroecosystem.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Cytoscape: a software environment for integrated models of biomolecular interaction networks

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Agricultural sustainability and intensive production practices

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Soil fertility and biodiversity in organic farming

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Coprophilous fungi: antibiotic discovery and functions in an underexplored arena of microbial defensive mutualism

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

An improved Greengenes taxonomy with explicit ranks for ecological and evolutionary analyses of bacteria and archaea

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Soil bacterial and fungal communities across a pH gradient in an arable soil.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

The UNITE database for molecular identification of fungi--recent updates and future perspectives

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

A new species of Phoma causes ascochyta blight symptoms on field peas (Pisum sativum) in South Australia

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

QVALITY: non-parametric estimation of q-values and posterior error probabilities

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

The unseen majority: soil microbes as drivers of plant diversity and productivity in terrestrial ecosystems

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Thermobacillus composti sp. nov., a moderately thermophilic bacterium isolated from a composting reactor

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Response of soil microbial biomass and community structures to conventional and organic farming systems under identical crop rotations.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Ranking the magnitude of crop and farming system effects on soil microbial biomass and genetic structure of bacterial communities.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Genome sequencing in microfabricated high-density picolitre reactors

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Global consequences of land use

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Forecasting agriculturally driven global environmental change.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Long-term agroecosystem experiments: assessing agricultural sustainability and global change

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4409162

Changes in bacterial community structure of agricultural land due to long-term organic and chemical amendments

26 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/25350160

12 December 2020

inferred from PubMed ID database lookup

Long-term effects of soil nutrient deficiency on arbuscular mycorrhizal communities

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Long-term organic farming fosters below and aboveground biota: Implications for soil quality, biological control and productivity

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Non-parametric multivariate analyses of changes in community structure

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Improving indicator species analysis by combining groups of sites

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Soil health and sustainability: managing the biotic component of soil quality

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Soil organic matter and biological soil quality indicators after 21 years of organic and conventional farming

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Long-term fertilization regimes affect bacterial community structure and diversity of an agricultural soil in northern China

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Environmental Impact of Different Agricultural Management Practices: Conventional vs. Organic Agriculture

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Some distance properties of latent root and vector methods used in multivariate analysis

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Does organic farming benefit biodiversity?

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Comparison of commonly used primer sets for evaluating arbuscular mycorrhizal fungal communities: Is there a universal solution?

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

The influence of soil properties on the structure of bacterial and fungal communities across land-use types

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

FITTING MULTIVARIATE MODELS TO COMMUNITY DATA: A COMMENT ON DISTANCE-BASED REDUNDANCY ANALYSIS

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Fungal community structure in soils of conventional and organic farming systems

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

A direct approach to false discovery rates

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Pyrosequencing Assessment of Soil Microbial Communities in Organic and Conventional Potato Farms

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Community structures and substrate utilization of bacteria in soils from organic and conventional farming systems of the DOK long-term field experiment

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2014.210

7 January 2021

Identifiers

DOI

10.1038/ISMEJ.2014.210

1 reference

8 August 2017

1 reference

8 August 2017

1 reference