(Q35376567)

8 August 2017

Automatic prediction of polysaccharide utilization loci in Bacteroidetes species (English)

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8 August 2017

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Nicolas Terrapon

1

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Bernard Henrissat

series ordinal

4

object named as

Bernard Henrissat

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8 August 2017

2

Vincent Lombard

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8 August 2017

3

Harry J Gilbert

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PubMed ID

25355788

8 August 2017

language of work or name

English

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publication date

28 October 2014

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8 August 2017

9

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based on heuristic

inferred from page(s)

published in

Bioinformatics

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8 August 2017

31

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8 August 2017

5

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8 August 2017

647-655

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Domain combinations in archaeal, eubacterial and eukaryotic proteomes

8 August 2017

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Predicting bacterial transcription units using sequence and expression data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Multidomain Carbohydrate-binding Proteins Involved in Bacteroides thetaiotaomicron Starch Metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Conservation of gene order: a fingerprint of proteins that physically interact

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

The abundance and variety of carbohydrate-active enzymes in the human gut microbiota

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Prediction of operons in microbial genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Pfam: the protein families database

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Microbial degradation of complex carbohydrates in the gut

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Annotation transfer for genomics: measuring functional divergence in multi-domain proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Structural and Functional Analysis of a Glycoside Hydrolase Family 97 Enzyme from Bacteroides thetaiotaomicron

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

TonB-dependent trans-envelope signalling: the exception or the rule?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

SusG: a unique cell-membrane-associated alpha-amylase from a prominent human gut symbiont targets complex starch molecules

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Starch Catabolism by a Prominent Human Gut Symbiont Is Directed by the Recognition of Amylose Helices

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Microbial ecology: human gut microbes associated with obesity

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

The carbohydrate-active enzymes database (CAZy) in 2013

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

The genome and surface proteome of Capnocytophaga canimorsus reveal a key role of glycan foraging systems in host glycoproteins deglycosylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

DOOR: a database for prokaryotic operons

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Detecting protein function and protein-protein interactions from genome sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

IMG/M: the integrated metagenome data management and comparative analysis system

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Mucosal glycan foraging enhances fitness and transmission of a saccharolytic human gut bacterial symbiont

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Coordinate regulation of glycan degradation and polysaccharide capsule biosynthesis by a prominent human gut symbiont

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Recognition and degradation of plant cell wall polysaccharides by two human gut symbionts

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Novel features of the polysaccharide-digesting gliding bacterium Flavobacterium johnsoniae as revealed by genome sequence analysis

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Effects of diet on resource utilization by a model human gut microbiota containing Bacteroides cellulosilyticus WH2, a symbiont with an extensive glycobiome

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

DoMosaics: software for domain arrangement visualization and domain-centric analysis of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

A powerful non-homology method for the prediction of operons in prokaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Polysaccharides utilization in human gut bacterium Bacteroides thetaiotaomicron: comparative genomics reconstruction of metabolic and regulatory networks

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Operons in Escherichia coli: genomic analyses and predictions

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

New substrates for TonB-dependent transport: do we only see the 'tip of the iceberg'?

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

JBrowse: a next-generation genome browser

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

ProOpDB: Prokaryotic Operon DataBase

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Detection of new protein domains using co-occurrence: application to Plasmodium falciparum

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

Operon prediction without a training set.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTU716

10.1093/BIOINFORMATICS/BTU716

21 January 2018

Identifiers

DOI

1 reference

journals/bioinformatics/TerraponLGH15

8 August 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

PubMed ID

25355788