(Q35497293)

English

Reprogramming of fibroblast nuclei in cloned bovine embryos involves major structural remodeling with both striking similarities and differences to nuclear phenotypes of in vitro fertilized embryos

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scholarly article

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Europe PubMed Central

PubMed publication ID

8 August 2017

Reprogramming of fibroblast nuclei in cloned bovine embryos involves major structural remodeling with both striking similarities and differences to nuclear phenotypes of in vitro fertilized embryos (English)

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Valeri Zakhartchenko

object named as

Valeri Zakhartchenko

11

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Volker J Schmid

object named as

Volker J Schmid

4

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object named as

Eckhard Wolf

12

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author name string

Jens Popken

1

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Europe PubMed Central

PubMed publication ID

8 August 2017

Alessandro Brero

2

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Europe PubMed Central

PubMed publication ID

8 August 2017

Daniela Koehler

3

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Axel Strauss

5

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Europe PubMed Central

PubMed publication ID

8 August 2017

Annegret Wuensch

6

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Tuna Guengoer

7

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Alexander Graf

8

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Stefan Krebs

9

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

Helmut Blum

10

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Europe PubMed Central

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8 August 2017

Thomas Cremer

13

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Europe PubMed Central

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8 August 2017

publication date

1 January 2014

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Europe PubMed Central

PubMed publication ID

8 August 2017

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Europe PubMed Central

PubMed publication ID

8 August 2017

5

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Europe PubMed Central

PubMed publication ID

8 August 2017

6

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

555-589

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Europe PubMed Central

PubMed publication ID

8 August 2017

describes a project that uses

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Europe PubMed Central

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC4615760/fullTextXML

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Positional changes of a pluripotency marker gene during structural reorganization of fibroblast nuclei in cloned early bovine embryos

1 reference

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Single molecule localization microscopy of the distribution of chromatin using Hoechst and DAPI fluorescent probes.

1 reference

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1 reference

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Geometry of the nucleus: a perspective on gene expression regulation

1 reference

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1 reference

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1 reference

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Fine mapping of genome activation in bovine embryos by RNA sequencing

1 reference

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1 reference

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1 reference

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How chromatin looping and nuclear envelope attachment affect genome organization in eukaryotic cell nuclei

1 reference

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The nuclear physique

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1 reference

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1 reference

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Single-cell Hi-C reveals cell-to-cell variability in chromosome structure

1 reference

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1 reference

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The RNA polymerase II carboxy-terminal domain (CTD) code

1 reference

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12 July 2018

Spatial dynamics of chromosome translocations in living cells.

1 reference

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12 July 2018

A polymer model explains the complexity of large-scale chromatin folding

1 reference

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12 July 2018

Transcription factories: genome organization and gene regulation

1 reference

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Fluorescence microscopy-a historical and technical perspective.

1 reference

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12 July 2018

Genome architecture: domain organization of interphase chromosomes

1 reference

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12 July 2018

The hierarchy of the 3D genome

1 reference

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12 July 2018

Functional implications of genome topology.

1 reference

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12 July 2018

The maternal to zygotic transition in mammals

1 reference

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12 July 2018

Chromatin structure outside and inside the nucleus

1 reference

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12 July 2018

Chromatin organization: form to function

1 reference

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12 July 2018

Local nucleosome dynamics facilitate chromatin accessibility in living mammalian cells.

1 reference

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12 July 2018

Heterochromatin reprogramming in rabbit embryos after fertilization, intra-, and inter-species SCNT correlates with preimplantation development.

1 reference

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12 July 2018

3D-FISH analysis of embryonic nuclei in mouse highlights several abrupt changes of nuclear organization during preimplantation development

1 reference

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Correlative fluorescence and EFTEM imaging of the organized components of the mammalian nucleus

1 reference

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12 July 2018

Dynamic organization of transcription compartments is dependent on functional nuclear architecture

1 reference

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Dynamic phosphorylation patterns of RNA polymerase II CTD during transcription

1 reference

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ChIA-PET analysis of transcriptional chromatin interactions.

1 reference

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12 July 2018

Chromosomes without a 30-nm chromatin fiber

1 reference

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Independence of repressive histone marks and chromatin compaction during senescent heterochromatic layer formation

1 reference

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12 July 2018

Formation of nuclear heterochromatin: the nucleolar point of view

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

12 July 2018

5-Methylcytosine and 5-hydroxymethylcytosine spatiotemporal profiles in the mouse zygote.

1 reference

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12 July 2018

The potential of 3D-FISH and super-resolution structured illumination microscopy for studies of 3D nuclear architecture: 3D structured illumination microscopy of defined chromosomal structures visualized by 3D (immuno)-FISH opens new perspectives fo

1 reference

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12 July 2018

Topological domains in mammalian genomes identified by analysis of chromatin interactions

1 reference

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12 July 2018

Structure, function and dynamics of nuclear subcompartments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

12 July 2018

A view of the chromatin landscape

1 reference

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Farnesyltransferase inhibitor treatment restores chromosome territory positions and active chromosome dynamics in Hutchinson-Gilford progeria syndrome cells.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

12 July 2018

Cell arrest and cell death in mammalian preimplantation development: lessons from the bovine model

1 reference

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12 July 2018

Heterochromatin establishment in the context of genome-wide epigenetic reprogramming

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

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Functional nuclear organization of transcription and DNA replication: a topographical marriage between chromatin domains and the interchromatin compartment.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

12 July 2018

Locking the genome: nuclear organization and cell fate

1 reference

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4D chromatin dynamics in cycling cells: Theodor Boveri's hypotheses revisited

1 reference

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12 July 2018

The fractal globule as a model of chromatin architecture in the cell

1 reference

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Charting histone modifications and the functional organization of mammalian genomes

1 reference

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A guide to super-resolution fluorescence microscopy

1 reference

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12 July 2018

Functional nuclear architecture studied by microscopy: present and future

1 reference

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12 July 2018

Global chromatin architecture reflects pluripotency and lineage commitment in the early mouse embryo

1 reference

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12 July 2018

Chromatin dynamics

1 reference

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12 July 2018

Initial genomics of the human nucleolus

1 reference

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12 July 2018

Chromosome territories

1 reference

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12 July 2018

Measurement of replication structures at the nanometer scale using super-resolution light microscopy

1 reference

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12 July 2018

Comprehensive mapping of long-range interactions reveals folding principles of the human genome

1 reference

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12 July 2018

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1 reference

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12 July 2018

The maternal-to-zygotic transition: a play in two acts

1 reference

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12 July 2018

Gene expression during minor genome activation in preimplantation bovine development.

1 reference

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12 July 2018

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1 reference

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12 July 2018

Analysis of cryo-electron microscopy images does not support the existence of 30-nm chromatin fibers in mitotic chromosomes in situ

1 reference

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12 July 2018

Unveiling the bovine embryo transcriptome during the maternal-to-embryonic transition

1 reference

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12 July 2018

Gene expression in the in vitro-produced preimplantation bovine embryos.

1 reference

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12 July 2018

Myc dynamically and preferentially relocates to a transcription factory occupied by Igh

1 reference

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12 July 2018

Dynamic genome architecture in the nuclear space: regulation of gene expression in three dimensions

1 reference

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12 July 2018

Dynamics of global transcriptome in bovine matured oocytes and preimplantation embryos

1 reference

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12 July 2018

Chromatin domains and the interchromatin compartment form structurally defined and functionally interacting nuclear networks.

1 reference

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12 July 2018

Long-range directional movement of an interphase chromosome site

1 reference

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12 July 2018

Intermingling of chromosome territories in interphase suggests role in translocations and transcription-dependent associations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

12 July 2018

Cell-by-cell dissection of gene expression and chromosomal interactions reveals consequences of nuclear reorganization

1 reference

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12 July 2018

Organization of chromatin in the interphase mammalian cell

1 reference

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12 July 2018

Form follows function: The genomic organization of cellular differentiation

1 reference

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12 July 2018

The spatial organization of the genome in mammalian cells

1 reference

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12 July 2018

Radial arrangement of chromosome territories in human cell nuclei: a computer model approach based on gene density indicates a probabilistic global positioning code

1 reference

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12 July 2018

Phosphorylation of serine 10 in histone H3, what for?

1 reference

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12 July 2018

Chromosome order in HeLa cells changes during mitosis and early G1, but is stably maintained during subsequent interphase stages.

1 reference

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12 July 2018

TO-PRO-3 is an optimal fluorescent dye for nuclear counterstaining in dual-colour FISH on paraffin sections

1 reference

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12 July 2018

Chromosome territories, nuclear architecture and gene regulation in mammalian cells

1 reference

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12 July 2018

Chromosome territories, interchromatin domain compartment, and nuclear matrix: an integrated view of the functional nuclear architecture

1 reference

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12 July 2018

Electric field-mediated BrUTP uptake by mouse oocytes, eggs, and embryos

1 reference

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12 July 2018

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1 reference

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12 July 2018

Quantitative motion analysis of subchromosomal foci in living cells using four-dimensional microscopy

1 reference

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12 July 2018

Compartmentalization of interphase chromosomes observed in simulation and experiment

1 reference

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12 July 2018

Ultrastructural analysis of transcription and splicing in the cell nucleus after bromo-UTP microinjection

1 reference

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12 July 2018

DAPI: a DNA-specific fluorescent probe

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12 July 2018

Gene gating: a hypothesis

1 reference

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12 July 2018

The major phosphorylation site of nucleophosmin (B23) is phosphorylated by a nuclear kinase II

1 reference

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12 July 2018

Immunoelectron microscopic localization of small nuclear ribonucleoproteins during bovine early embryogenesis

1 reference

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12 July 2018

Mithramycin and DIPI: A pair of fluorochromes specific for GC- and AT-rich DNA respectively

1 reference

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12 July 2018

Nuclear architecture in developmental biology and cell specialisation.

1 reference

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21 January 2018

Reprogramming of active and repressive histone modifications following nuclear transfer with rabbit mesenchymal stem cells and adult fibroblasts.

1 reference

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21 January 2018

Changes of higher order chromatin arrangements during major genome activation in bovine preimplantation embryos

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Quantitative monitoring of pluripotency gene activation after somatic cloning in cattle.

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Dynamics of single mRNP nucleocytoplasmic transport and export through the nuclear pore in living cells.

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Histone lysine methylation patterns in human cell types are arranged in distinct three-dimensional nuclear zones

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Transcription factories are nuclear subcompartments that remain in the absence of transcription

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Remodeling of nuclear architecture by the thiodioxoxpiperazine metabolite chaetocin

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

The origin and impact of embryonic aneuploidy

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Effects of oocyte quality, incubation time and maturation environment on the number of chromosomal abnormalities in IVF-derived early bovine embryos

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

The genome: an isochore ensemble and its evolution.

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Isolation of nascent messenger RNA from mouse preimplantation embryos

1 reference

https://api.crossref.org/works/10.4161%2F19491034.2014.979712

21 January 2018

Onset of transcription in bovine oocytes and preimplantation embryos.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4615760

26 September 2018

Fine Structural in Situ Analysis of Nascent DNA Movement Following DNA Replication

1 reference

https://pubmed.ncbi.nlm.nih.gov/25482066

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Autoradiographic detection of the earliest stage of [3H]-uridine incorporation into the cow embryo

1 reference

https://pubmed.ncbi.nlm.nih.gov/25482066

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A high proportion of bovine blastocysts produced in vitro are mixoploid

1 reference

https://pubmed.ncbi.nlm.nih.gov/25482066

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transcribed DNA is preferentially located in the perichromatin region of mammalian cell nuclei

1 reference

https://pubmed.ncbi.nlm.nih.gov/25482066

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Epigenomic differentiation in mouse preimplantation nuclei of biparental, parthenote and cloned embryos

1 reference

https://pubmed.ncbi.nlm.nih.gov/25482066

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Preface. New models of the cell nucleus: crowding, entropic forces, phase separation, and fractals

1 reference

https://pubmed.ncbi.nlm.nih.gov/25482066

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.4161/19491034.2014.979712

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

8 August 2017

ResearchGate publication ID

0 references

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