(Q35557690)

8 August 2017

title

LOCnet and LOCtarget: sub-cellular localization for structural genomics targets (English)

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8 August 2017

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2

Burkhard Rost

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8 August 2017

Rajesh Nair

1

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8 August 2017

language of work or name

English

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publication date

1 July 2004

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8 August 2017

published in

Nucleic Acids Research

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8 August 2017

volume

32

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8 August 2017

issue

Web Server issue

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8 August 2017

page(s)

W517-21

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The distribution and query systems of the RCSB Protein Data Bank

8 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Better prediction of sub-cellular localization by combining evolutionary and structural information.

27 July 2018

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Structural genomics: computational methods for structure analysis

27 July 2018

1 reference

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Annotation in three dimensions. PINTS: Patterns in Non-homologous Tertiary Structures

27 July 2018

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The PredictProtein server.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

The Protein Data Bank and structural genomics

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

27 July 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Review: protein secondary structure prediction continues to rise.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Finding nuclear localization signals

27 July 2018

1 reference

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Twilight zone of protein sequence alignments

27 July 2018

1 reference

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PSORT: a program for detecting sorting signals in proteins and predicting their subcellular localization

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Wanted: subcellular localization of proteins based on sequence

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Using neural networks for prediction of the subcellular location of proteins

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

27 July 2018

1 reference

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Identification of prokaryotic and eukaryotic signal peptides and prediction of their cleavage sites

27 July 2018

1 reference

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PHD: predicting one-dimensional protein structure by profile-based neural networks

27 July 2018

1 reference

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Database of homology-derived protein structures and the structural meaning of sequence alignment

27 July 2018

1 reference

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The T-DNA-linked VirD2 protein contains two distinct functional nuclear localization signals

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Automatic target selection for structural genomics on eukaryotes

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Annotating proteins from endoplasmic reticulum and Golgi apparatus in eukaryotic proteomes

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

From protein structure to biochemical function?

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

LOC3D: annotate sub-cellular localization for protein structures

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

NLSdb: database of nuclear localization signals

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Sequence conserved for subcellular localization

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Inferring sub-cellular localization through automated lexical analysis.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Support vector machine approach for protein subcellular localization prediction

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

Predicting subcellular localization of proteins based on their N-terminal amino acid sequence

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

The SWISS-PROT protein sequence database and its supplement TrEMBL in 2000.

26 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=441579

26 September 2018

Identifiers

DOI

10.1093/NAR/GKH441

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8 August 2017

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DBLP Dataset 2021-01-02

28 January 2021

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8 August 2017

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