(Q35574375)

8 August 2017

Evaluation of metatranscriptomic protocols and application to the study of freshwater microbial communities (English)

1 reference

8 August 2017

0 references

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

Luis Miguel Rodríguez-R

series ordinal

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

Konstantinos T. Konstantinidis

5 June 2020

series ordinal

5

object named as

Konstantinos T Konstantinidis

1 reference

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5 June 2020

4

Chengwei Luo

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

2

Rachel Poretsky

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

language of work or name

1 reference

1 December 2014

1 reference

Environmental Microbiology Reports

8 August 2017

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

volume

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

issue

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

page(s)

640-655

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

Genome sequences of rare, uncultured bacteria obtained by differential coverage binning of multiple metagenomes

5 June 2020

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Differential expression analysis for sequence count data

21 January 2018

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Gene ontology: tool for the unification of biology

21 January 2018

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Evaluation of statistical methods for normalization and differential expression in mRNA-Seq experiments

21 January 2018

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Activity of abundant and rare bacteria in a coastal ocean

21 January 2018

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Metagenomic approach studying the taxonomic and functional diversity of the bacterial community in a mesotrophic lake (Lac du Bourget--France).

21 January 2018

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Community-wide analysis of microbial genome sequence signatures

21 January 2018

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The microbial engines that drive Earth's biogeochemical cycles.

21 January 2018

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Statistical methods for identifying differentially expressed genes in RNA-Seq experiments

21 January 2018

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Transcription factor control of growth rate dependent genes in Saccharomyces cerevisiae: a three factor design

21 January 2018

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Microbial community gene expression in ocean surface waters

21 January 2018

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Efficient and robust RNA-seq process for cultured bacteria and complex community transcriptomes

21 January 2018

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Quantitative analysis of a deeply sequenced marine microbial metatranscriptome

21 January 2018

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Expression patterns reveal niche diversification in a marine microbial assemblage

21 January 2018

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Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities

21 January 2018

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Synechococcus elongatus PCC 7942 is more tolerant to chromate as compared to Synechocystis sp. PCC 6803.

21 January 2018

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Biases in Illumina transcriptome sequencing caused by random hexamer priming

21 January 2018

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Validation of two ribosomal RNA removal methods for microbial metatranscriptomics

21 January 2018

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Verrucomicrobia div. nov., a new division of the bacteria containing three new species of Prosthecobacter

21 January 2018

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Global responses of Methanococcus maripaludis to specific nutrient limitations and growth rate

21 January 2018

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Spatial patterns and light-driven variation of microbial population gene expression in surface waters of the oligotrophic open ocean

21 January 2018

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Metatranscriptomic analysis of ammonia-oxidizing organisms in an estuarine bacterioplankton assemblage.

21 January 2018

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Relationship between abundance and specific activity of bacterioplankton in open ocean surface waters

21 January 2018

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Dormancy contributes to the maintenance of microbial diversity

21 January 2018

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Distribution, diversity and ecology of aerobic CO-oxidizing bacteria

21 January 2018

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Phylum Verrucomicrobia representatives share a compartmentalized cell plan with members of bacterial phylum Planctomycetes

21 January 2018

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Direct comparisons of Illumina vs. Roche 454 sequencing technologies on the same microbial community DNA sample

21 January 2018

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MyTaxa: an advanced taxonomic classifier for genomic and metagenomic sequences

21 January 2018

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Computational analysis of bacterial RNA-Seq data

21 January 2018

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High-throughput single-cell sequencing identifies photoheterotrophs and chemoautotrophs in freshwater bacterioplankton.

21 January 2018

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Culture-dependent and independent analyses of the microbial communities inhabiting the giant duckweed (Spirodela polyrrhiza) rhizoplane and isolation of a variety of rarely cultivated organisms within the phylum Verrucomicrobia.

21 January 2018

1 reference

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Sizing up metatranscriptomics

21 January 2018

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A guide to the natural history of freshwater lake bacteria

21 January 2018

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Technical and biological variance structure in mRNA-Seq data: life in the real world

21 January 2018

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Metagenomic insights into the evolution, function, and complexity of the planktonic microbial community of Lake Lanier, a temperate freshwater ecosystem

21 January 2018

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Metatranscriptomic analysis of autonomously collected and preserved marine bacterioplankton

21 January 2018

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Pattern and synchrony of gene expression among sympatric marine microbial populations.

21 January 2018

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Identifying biologically relevant differences between metagenomic communities

21 January 2018

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The rare bacterial biosphere

21 January 2018

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Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre

21 January 2018

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Transporter genes expressed by coastal bacterioplankton in response to dissolved organic carbon

21 January 2018

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21 January 2018

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GC-content normalization for RNA-Seq data

21 January 2018

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Unsupervised discovery of microbial population structure within metagenomes using nucleotide base composition

21 January 2018

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Ecological genomics of marine picocyanobacteria

21 January 2018

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Rubritalea marina gen. nov., sp. nov., a marine representative of the phylum 'Verrucomicrobia', isolated from a sponge (Porifera).

21 January 2018

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Lake microbial communities are resilient after a whole-ecosystem disturbance

21 January 2018

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Integrated metatranscriptomic and metagenomic analyses of stratified microbial assemblages in the open ocean

21 January 2018

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Development and quantitative analyses of a universal rRNA-subtraction protocol for microbial metatranscriptomics

21 January 2018

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Community transcriptomics reveals universal patterns of protein sequence conservation in natural microbial communities

21 January 2018

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Phylogenetic screening of ribosomal RNA gene-containing clones in Bacterial Artificial Chromosome (BAC) libraries from different depths in Monterey Bay.

21 January 2018

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The COG database: an updated version includes eukaryotes

21 January 2018

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Application of tetranucleotide frequencies for the assignment of genomic fragments

21 January 2018

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Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome

21 January 2018

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Diel gene expression profiles of a phosphorus limited mountain lake using metatranscriptomics.

21 January 2018

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High-density microarray-mediated gene expression profiling of Escherichia coli

21 January 2018

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The Universal Protein Resource (UniProt): an expanding universe of protein information

21 January 2018

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Metagenomic insights into strategies of carbon conservation and unusual sulfur biogeochemistry in a hypersaline Antarctic lake

21 January 2018

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A parsimony approach to biological pathway reconstruction/inference for genomes and metagenomes

21 January 2018

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https://api.crossref.org/works/10.1111%2F1758-2229.12180

Phylogenomics of prokaryotic ribosomal proteins

21 January 2018

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Ab initio gene identification in metagenomic sequences

21 January 2018

1 reference

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21 January 2018

Identifiers

DOI

10.1111/1758-2229.12180

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:25756118%20AND%20SRC:MED&resulttype=core&format=json

5 June 2020

1 reference