(Q35599352)

9 August 2017

title

MetaSV: an accurate and integrative structural-variant caller for next generation sequencing (English)

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9 August 2017

5

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9 August 2017

Alexej Abyzov

6

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author name string

Marghoob Mohiyuddin

1

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9 August 2017

John C Mu

2

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9 August 2017

Jian Li

3

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9 August 2017

Narges Bani Asadi

4

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9 August 2017

Wing H Wong

7

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9 August 2017

Hugo Y K Lam

8

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9 August 2017

language of work or name

English

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publication date

10 April 2015

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9 August 2017

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9 August 2017

volume

31

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9 August 2017

issue

16

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9 August 2017

page(s)

2741-2744

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Creative Commons Attribution 4.0 International

9 August 2017

copyright license

start time

2 October 2016

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April 2023 Public Data File from Crossref

copyright status

copyrighted

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cites work

Analysis of deletion breakpoints from 1,092 humans reveals details of mutation mechanisms

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

VarSim: a high-fidelity simulation and validation framework for high-throughput genome sequencing with cancer applications.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

MindTheGap: integrated detection and assembly of short and long insertions

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

LUMPY: a probabilistic framework for structural variant discovery.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

DELLY: structural variant discovery by integrated paired-end and split-read analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Detecting and annotating genetic variations using the HugeSeq pipeline

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

CNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Mapping copy number variation by population-scale genome sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

AGE: defining breakpoints of genomic structural variants at single-nucleotide resolution, through optimal alignments with gap excision

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Enhanced structural variant and breakpoint detection using SVMerge by integration of multiple detection methods and local assembly

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Structural variation in the human genome and its role in disease

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Nucleotide-resolution analysis of structural variants using BreakSeq and a breakpoint library

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Human genome sequencing using unchained base reads on self-assembling DNA nanoarrays

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

Pindel: a pattern growth approach to detect break points of large deletions and medium sized insertions from paired-end short reads

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4528635

10.1093/BIOINFORMATICS/BTV204

12 July 2018

Identifiers

DOI

1 reference

journals/bioinformatics/MohiyuddinMLAGA15

9 August 2017

DBLP publication ID

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DBLP Dataset 2021-01-02

28 January 2021

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9 August 2017

1 reference