(Q35620895)

9 August 2017

Nuclear hormone 1α,25-dihydroxyvitamin D3 elicits a genome-wide shift in the locations of VDR chromatin occupancy (English)

1 reference

9 August 2017

Sami Heikkinen

1

0 references

Vladimir Benes

object named as

Vladimir Benes

5

0 references

Carsten Carlberg

object named as

Carsten Carlberg

6

0 references

author name string

Sami Väisänen

2

1 reference

9 August 2017

Petri Pehkonen

3

1 reference

9 August 2017

Sabine Seuter

4

1 reference

9 August 2017

language of work or name

English

0 references

publication date

16 August 2011

1 reference

9 August 2017

Nucleic Acids Research

1 reference

9 August 2017

39

1 reference

9 August 2017

9181-9193

1 reference

9 August 2017

21

1 reference

Creative Commons Attribution-NonCommercial 3.0 Unported

9 August 2017

start time

4 October 2016

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

limma

1 reference

22 June 2022

https://europepmc.org/article/PMC/3241659

inferred from PubMed Central ID database lookup

cites work

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A ChIP-seq defined genome-wide map of vitamin D receptor binding: associations with disease and evolution

12 July 2018

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Primary effect of 1α,25(OH)₂D₃ on IL-10 expression in monocytes is short-term down-regulation

12 July 2018

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12 July 2018

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A downstream intergenic cluster of regulatory enhancers contributes to the induction of CYP24A1 expression by 1alpha,25-dihydroxyvitamin D3.

12 July 2018

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ELL is an HIF-1alpha partner that regulates and responds to hypoxia response in PC3 cells

12 July 2018

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Macrophage-derived IL-1beta stimulates Wnt signaling and growth of colon cancer cells: a crosstalk interrupted by vitamin D3.

12 July 2018

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12 July 2018

1 reference

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Convergence of IL-1beta and VDR activation pathways in human TLR2/1-induced antimicrobial responses

12 July 2018

1 reference

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

12 July 2018

1 reference

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Cyclical chromatin looping and transcription factor association on the regulatory regions of the p21 (CDKN1A) gene in response to 1alpha,25-dihydroxyvitamin D3.

12 July 2018

1 reference

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12 July 2018

1 reference

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Model-based analysis of ChIP-Seq (MACS)

12 July 2018

1 reference

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Vitamin D and human health: lessons from vitamin D receptor null mice.

12 July 2018

1 reference

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RSAT: regulatory sequence analysis tools

12 July 2018

1 reference

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lumi: a pipeline for processing Illumina microarray

12 July 2018

1 reference

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Vitamin D-dependent recruitment of corepressors to vitamin D/retinoid X receptor heterodimers

12 July 2018

1 reference

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Molecular actions of 1,25-dihydroxyvitamin D3 on genes involved in calcium homeostasis

12 July 2018

1 reference

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12 July 2018

1 reference

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Molecular basis of the potential of vitamin D to prevent cancer

12 July 2018

1 reference

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Thrombomodulin: from haemostasis to inflammation and tumourigenesis

12 July 2018

1 reference

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Functional characterization of vitamin D responding regions in the human 5-Lipoxygenase gene

12 July 2018

1 reference

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Selective use of multiple vitamin D response elements underlies the 1 alpha,25-dihydroxyvitamin D3-mediated negative regulation of the human CYP27B1 gene

12 July 2018

1 reference

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Detailed molecular understanding of agonistic and antagonistic vitamin D receptor ligands.

12 July 2018

1 reference

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Linear models and empirical bayes methods for assessing differential expression in microarray experiments

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Regulation of the human p21(waf1/cip1) gene promoter via multiple binding sites for p53 and the vitamin D3 receptor.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Immune regulation of 25-hydroxyvitamin-D3-1alpha-hydroxylase in human monocytes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Convergence of vitamin D and retinoic acid signalling at a common hormone response element

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Regulation of multiple insulin-like growth factor binding protein genes by 1alpha,25-dihydroxyvitamin D3.

12 July 2018

1 reference

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Large-scale in silico and microarray-based identification of direct 1,25-dihydroxyvitamin D3 target genes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Human cathelicidin antimicrobial peptide (CAMP) gene is a direct target of the vitamin D receptor and is strongly up-regulated in myeloid cells by 1,25-dihydroxyvitamin D3

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Transrepression by a liganded nuclear receptor via a bHLH activator through co-regulator switching

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Spatio-temporal activation of chromatin on the human CYP24 gene promoter in the presence of 1alpha,25-Dihydroxyvitamin D3.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Regulation of the human cyclin C gene via multiple vitamin D3-responsive regions in its promoter

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

SP100 inhibits ETS1 activity in primary endothelial cells

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Overview of general physiologic features and functions of vitamin D.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Bioconductor: open software development for computational biology and bioinformatics

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Profiling 1,25-dihydroxyvitamin D3-regulated gene expression by microarray analysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Genetic signatures of differentiation induced by 1alpha,25-dihydroxyvitamin D3 in human colon cancer cells.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Identification of a Novel Glial Cell Line-derived Neurotrophic Factor-inducible Gene Required for Renal Branching Morphogenesis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Differential nuclear receptor signalling from DR4-type response elements

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

The vitamin D hormone and its nuclear receptor: molecular actions and disease states.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Suppression of TNF-alpha-induced apoptosis by NF-kappaB

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Mathematical formulae for the prediction of the residual beta cell function during the first two years of disease in children and adolescents with insulin-dependent diabetes mellitus

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Interaction of human thyroid hormone receptor beta with transcription factor TFIIB may mediate target gene derepression and activation by thyroid hormone

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Natural vitamin D3 response elements formed by inverted palindromes: polarity-directed ligand sensitivity of vitamin D3 receptor-retinoid X receptor heterodimer-mediated transactivation.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Direct repeats as selective response elements for the thyroid hormone, retinoic acid, and vitamin D3 receptors

12 July 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

12 July 2018

https://api.crossref.org/works/10.1093%2FNAR%2FGKR654

Vitamin D: a pleiotropic hormone.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Controlling the chromatin organization of vitamin D target genes by multiple vitamin D receptor binding sites.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Regulation of IL-1 family cytokines IL-1alpha, IL-1 receptor antagonist, and IL-18 by 1,25-dihydroxyvitamin D3 in primary keratinocytes

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Immunophenotypic changes induced on human HL60 leukaemia cells by 1alpha,25-dihydroxyvitamin D3 and 12-O-tetradecanoyl phorbol-13-acetate

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Gene regulation by vitamin D3.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3241659

Two nuclear signalling pathways for vitamin D

25 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1093%2FNAR%2FGKR654

Vitamin D3 and the immune system: maintaining the balance in health and disease

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21846776

12 December 2020

inferred from PubMed ID database lookup

DNA microarray analysis of changes in gene expression induced by 1,25-dihydroxyvitamin D3 in human promyelocytic leukemia HL-60 cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21846776

12 December 2020

inferred from PubMed ID database lookup

VDR-Alien: a novel, DNA-selective vitamin D(3) receptor-corepressor partnership

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21846776

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GKR654

1 reference

9 August 2017

1 reference

9 August 2017

1 reference