(Q35729470)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

title

Diverse, rare microbial taxa responded to the Deepwater Horizon deep-sea hydrocarbon plume (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

Deepwater Horizon explosion

20 February 2020

main subject

deep sea

0 references

0 references

Deepwater Horizon oil spill

1 reference

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

4

Annalisa Bracco

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

author name string

Sharon Grim

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Mitchell Sogin

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Melitza Crespo-Medina

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

Samantha B Joye

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

language of work or name

English

0 references

publication date

31 July 2015

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

volume

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

issue

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

page(s)

400-415

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International

20 February 2020

copyright license

start time

31 July 2015

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

Single-cell genomics reveals features of a Colwellia species that was dominant during the Deepwater Horizon oil spill

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Interpreting 16S metagenomic data without clustering to achieve sub-OTU resolution

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Host-specificity among abundant and rare taxa in the sponge microbiome

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Oligotyping: Differentiating between closely related microbial taxa using 16S rRNA gene data.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Sewage reflects the distribution of human faecal Lachnospiraceae.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Complete genome sequence of the pyrene-degrading bacterium Cycloclasticus sp. strain P1

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Microbial communities in the subglacial waters of the Vatnajökull ice cap, Iceland

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Distribution and in situ abundance of sulfate-reducing bacteria in diverse marine hydrocarbon seep sediments

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Metagenome, metatranscriptome and single-cell sequencing reveal microbial response to Deepwater Horizon oil spill

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Comparative genomics reveals adaptation by Alteromonas sp. SN2 to marine tidal-flat conditions: cold tolerance and aromatic hydrocarbon metabolism

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Dynamic autoinoculation and the microbial ecology of a deep water hydrocarbon irruption.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Review of flow rate estimates of the Deepwater Horizon oil spill

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Exploring the diversity of Gardnerella vaginalis in the genitourinary tract microbiota of monogamous couples through subtle nucleotide variation.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Natural gas and temperature structured a microbial community response to the Deepwater Horizon oil spill.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Potential for chemolithoautotrophy among ubiquitous bacteria lineages in the dark ocean.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Composition and fate of gas and oil released to the water column during the Deepwater Horizon oil spill.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Energy starved Candidatus Pelagibacter ubique substitutes light-mediated ATP production for endogenous carbon respiration

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Fate of dispersants associated with the deepwater horizon oil spill.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

A persistent oxygen anomaly reveals the fate of spilled methane in the deep Gulf of Mexico

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Deep-sea oil plume enriches indigenous oil-degrading bacteria

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Tracking hydrocarbon plume transport and biodegradation at Deepwater Horizon.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Search and clustering orders of magnitude faster than BLAST

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Ironing out the wrinkles in the rare biosphere through improved OTU clustering

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Spatial structure and activity of sedimentary microbial communities underlying a Beggiatoa spp. mat in a Gulf of Mexico hydrocarbon seep

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Wrinkles in the rare biosphere: pyrosequencing errors can lead to artificial inflation of diversity estimates

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Dynamics of the SAR11 bacterioplankton lineage in relation to environmental conditions in the oligotrophic North Pacific subtropical gyre

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Exploring microbial diversity and taxonomy using SSU rRNA hypervariable tag sequencing

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

SILVA: a comprehensive online resource for quality checked and aligned ribosomal RNA sequence data compatible with ARB

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Impacts of Hurricanes Katrina and Rita on the microbial landscape of the New Orleans area

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

The bacterial species definition in the genomic era.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Genome Streamlining in a Cosmopolitan Oceanic Bacterium

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Genomic insights that advance the species definition for prokaryotes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

ARB: a software environment for sequence data

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

SAR11 clade dominates ocean surface bacterioplankton communities.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

A natural species concept for prokaryotes

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Alcanivorax borkumensis gen. nov., sp. nov., a new, hydrocarbon-degrading and surfactant-producing marine bacterium.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Cycloclasticus pugetii gen. nov., sp. nov., an aromatic hydrocarbon-degrading bacterium from marine sediments

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Use of nuclepore filters for counting bacteria by fluorescence microscopy

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Growth rates of different phylogenetic bacterioplankton groups in a coastal upwelling system

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Alteromonas as a key agent of polycyclic aromatic hydrocarbon biodegradation in crude oil-contaminated coastal sediment

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Propane respiration jump-starts microbial response to a deep oil spill

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Isolation and characterization of Pseudoalteromonas strains with divergent polycyclic aromatic hydrocarbon catabolic properties

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

Aerobic methane oxidation and methanotroph community composition during seasonal stratification in Mono Lake, California (USA).

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4737931

The anaerobic oxidation of methane and sulfate reduction in sediments from Gulf of Mexico cold seeps

25 September 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Comment on "A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico"

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Molecular biogeochemistry of sulfate reduction, methanogenesis and the anaerobic oxidation of methane at Gulf of Mexico cold seeps

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Impact of natural oil and higher hydrocarbons on microbial diversity, distribution, and activity in Gulf of Mexico cold-seep sediments

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Weak coupling between sulfate reduction and the anaerobic oxidation of methane in methane-rich seafloor sediments during ex situ incubation

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

The rise and fall of methanotrophy following a deepwater oil-well blowout

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Characterization of subsurface polycyclic aromatic hydrocarbons at the Deepwater Horizon site

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Biogeochemical signatures and microbial activity of different cold-seep habitats along the Gulf of Mexico deep slope

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Magnitude and oxidation potential of hydrocarbon gases released from the BP oil well blowout

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Cold-seep carbonates of the middle and lower continental slope, northern Gulf of Mexico

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

Response to Comment on "A Persistent Oxygen Anomaly Reveals the Fate of Spilled Methane in the Deep Gulf of Mexico"

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

inferred from DOI database lookup

7 January 2021

based on heuristic

Formation dynamics of subsurface hydrocarbon intrusions following the Deepwater Horizon blowout

1 reference

https://api.crossref.org/works/10.1038%2FISMEJ.2015.121

inferred from DOI database lookup

7 January 2021

based on heuristic

Identifiers

DOI

10.1038/ISMEJ.2015.121

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json

20 February 2020

PubMed publication ID

26230048

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26230048%20AND%20SRC:MED&resulttype=core&format=json