(Q35746809)

10 August 2017

title

Partitioning transcript variation in Drosophila: abundance, isoforms, and alleles (English)

1 reference

10 August 2017

0 references

Brandon M Walts

3

0 references

Henry V. Baker

object named as

Henry V Baker

5

0 references

Lauren McIntyre

object named as

Lauren M McIntyre

8

0 references

author name string

Yajie Yang

1

1 reference

10 August 2017

Rita M Graze

2

1 reference

10 August 2017

Cecilia M Lopez

4

1 reference

10 August 2017

Marta L Wayne

6

1 reference

10 August 2017

Sergey V Nuzhdin

7

1 reference

10 August 2017

publication date

1 November 2011

1 reference

10 August 2017

1 reference

10 August 2017

volume

1

1 reference

10 August 2017

issue

6

1 reference

10 August 2017

page(s)

427-436

1 reference

RNA-seq: technical variability and sampling.

10 August 2017

cites work

1 reference

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27 July 2018

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Genome-wide misexpression of X-linked versus autosomal genes associated with hybrid male sterility

27 July 2018

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Natural selection on cis and trans regulation in yeasts

27 July 2018

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27 July 2018

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Regulatory divergence in Drosophila revealed by mRNA-seq.

27 July 2018

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A comparative analysis of DNA barcode microarray feature size

27 July 2018

1 reference

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Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data

27 July 2018

1 reference

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Allele-specific chromatin remodeling in the ZPBP2/GSDMB/ORMDL3 locus associated with the risk of asthma and autoimmune disease.

27 July 2018

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Regulatory divergence in Drosophila melanogaster and D. simulans, a genomewide analysis of allele-specific expression

27 July 2018

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Digital RNA allelotyping reveals tissue-specific and allele-specific gene expression in human

27 July 2018

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Genetic predisposition to human disease: allele-specific expression and low-penetrance regulatory loci

27 July 2018

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27 July 2018

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27 July 2018

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Genetic changes accompanying the evolution of host specialization in Drosophila sechellia.

27 July 2018

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Sex-specific splicing in Drosophila: widespread occurrence, tissue specificity and evolutionary conservation

27 July 2018

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Using gene expression to investigate the genetic basis of complex disorders

27 July 2018

1 reference

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Regulatory polymorphism in vitamin K epoxide reductase complex subunit 1 (VKORC1) affects gene expression and warfarin dose requirement

27 July 2018

1 reference

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Allele-specific up-regulation of FGFR2 increases susceptibility to breast cancer

27 July 2018

1 reference

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Differential allelic expression in the human genome: a robust approach to identify genetic and epigenetic cis-acting mechanisms regulating gene expression

27 July 2018

1 reference

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Evolution of gene expression in the Drosophila olfactory system

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Genome-wide allele-specific expression analysis using Massively Parallel Signature Sequencing (MPSS) reveals cis- and trans-effects on gene expression in maize hybrid meristem tissue.

27 July 2018

1 reference

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Simpler mode of inheritance of transcriptional variation in male Drosophila melanogaster

27 July 2018

1 reference

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Population genomics: whole-genome analysis of polymorphism and divergence in Drosophila simulans

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Population genomics of human gene expression

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Array feature size influences nucleic acid surface capture in DNA microarrays

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Genetics of global gene expression

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Sex-specific expression of alternative transcripts in Drosophila.

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Description of the data from the Collaborative Study on the Genetics of Alcoholism (COGA) and single-nucleotide polymorphism genotyping for Genetic Analysis Workshop 14

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Polymorphisms affecting gene regulation and mRNA processing: broad implications for pharmacogenetics

27 July 2018

1 reference

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27 July 2018

1 reference

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Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

A survey of genetic and epigenetic variation affecting human gene expression

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Allelic variation in gene expression is common in the human genome

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Paucity of genes on the Drosophila X chromosome showing male-biased expression

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Systematic variation in gene expression patterns in human cancer cell lines

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Tokens of love: functions and regulation of Drosophila male accessory gland products

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

The regulation of the yolk protein genes, a family of sex differentiation genes in Drosophila melanogaster

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Quantitative monitoring of gene expression patterns with a complementary DNA microarray

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Statistical methods for assessing agreement between two methods of clinical measurement

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Basic local alignment search tool

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Key considerations for measuring allelic expression on a genomic scale using high-throughput sequencing

27 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Understanding mechanisms underlying human gene expression variation with RNA sequencing

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Incorporating sequence quality data into alignment improves DNA read mapping

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Unlocking the secrets of the genome

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Global analysis of allele-specific expression in Arabidopsis thaliana

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Regulatory changes underlying expression differences within and between Drosophila species.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Genome-wide analysis of transcript isoform variation in humans

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Genome-wide patterns of single-feature polymorphism in Arabidopsis thaliana

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

A genotype calling algorithm for affymetrix SNP arrays.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

The genomics of gene expression

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Evolutionary changes in cis and trans gene regulation

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Evolution of gene expression in the Drosophila melanogaster subgroup.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

The contributions of sex, genotype and age to transcriptional variance in Drosophila melanogaster

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Biallelic expression of imprinted genes in the mouse germ line: implications for erasure, establishment, and mechanisms of genomic imprinting

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Misleading Statistics: Errors in Textbooks, Software and Manuals

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3276160

Single-nucleotide polymorphism analysis by pyrosequencing

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22384353

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Sex-dependent gene expression and evolution of the Drosophila transcriptome

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22384353

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1534/G3.111.000596

1 reference

10 August 2017

1 reference

10 August 2017

1 reference