(Q35839806)

English

RAD sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels

scientific article published on 12 November 2015

In more languages

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

RAD sequencing reveals within-generation polygenic selection in response to anthropogenic organic and metal contamination in North Atlantic Eels (English)

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

object named as

M Laporte

1

0 references

object named as

P Labadie

7

0 references

Louis Bernatchez

11

object named as

L Bernatchez

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

author name string

S A Pavey

2

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

C Rougeux

3

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

F Pierron

4

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

M Lauzent

5

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

H Budzinski

6

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

E Geneste

8

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

P Couture

9

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

M Baudrimont

10

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

language of work or name

1 reference

based on heuristic

inferred from title

publication date

12 November 2015

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Molecular Ecology

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

25

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

1

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

219-237

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

Natural hybrids in Atlantic eels (Anguilla anguilla, A. rostrata): evidence for successful reproduction and fluctuating abundance in space and time

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

All roads lead to home: panmixia of European eel in the Sargasso Sea.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Transcriptome profile analysis reveals specific signatures of pollutants in Atlantic eels

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Identifying adaptive genetic divergence among populations from genome scans.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Evolutionary change driven by metal exposure as revealed by coding SNP genome scan in wild yellow perch (Perca flavescens).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Effects of contaminants on genetic patterns in aquatic organisms: a review

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

How does exposure to nickel and cadmium affect the transcriptome of yellow perch (Perca flavescens)--results from a 1000 candidate-gene microarray

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Letter to the Editor: On the term 'interaction' and related phrases in the literature on Random Forests

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Evolutionary ecotoxicology of wild yellow perch (Perca flavescens) populations chronically exposed to a polymetallic gradient

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Detecting genotypic changes associated with selective mortality at sea in Atlantic salmon: polygenic multilocus analysis surpasses genome scan.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Genomic approaches with natural fish populations from polluted environments

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Integration of Random Forest with population-based outlier analyses provides insight on the genomic basis and evolution of run timing in Chinook salmon (Oncorhynchus tshawytscha).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Stacks: an analysis tool set for population genomics

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Random forests for genomic data analysis

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Detecting gene-gene interactions that underlie human diseases

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Population genetics of the American eel (Anguilla rostrata): FST = 0 and North Atlantic Oscillation effects on demographic fluctuations of a panmictic species.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

In absence of local adaptation, plasticity and spatially varying selection rule: a view from genomic reaction norms in a panmictic species (Anguilla rostrata).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The variant call format and VCFtools

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Freshwater biodiversity: importance, threats, status and conservation challenges

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

A genome-scan method to identify selected loci appropriate for both dominant and codominant markers: a Bayesian perspective

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Testing for associations between loci and environmental gradients using latent factor mixed models.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The genetic consequences of spatially varying selection in the panmictic American eel (Anguilla rostrata).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Evidence of population genetic effects of long-term exposure to contaminated sediments-a multi-endpoint study with copepods

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The effects of contaminants in European eel: a review

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Random forests for genetic association studies.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Fifteen years of genomewide scans for selection: trends, lessons and unaddressed genetic sources of complication

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Predicting adaptive phenotypes from multilocus genotypes in Sitka spruce (Picea sitchensis) using random forest

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

MAKER2: an annotation pipeline and genome-database management tool for second-generation genome projects

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Genomic footprints of speciation in Atlantic eels (Anguilla anguilla and A. rostrata).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Genotyping by sequencing for genomic prediction in a soybean breeding population

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Postnatal exposure to PCB 153 and PCB 180, but not to PCB 52, produces changes in activity level and stimulus control in outbred male Wistar Kyoto rats

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Spatial analysis method (sam): a software tool combining molecular and environmental data to identify candidate loci for selection

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Detecting anthropogenic effects on a vulnerable species, the freshwater blenny (Salaria fluviatilis): The importance of considering key ecological variables

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

RAD-QTL Mapping Reveals Both Genome-Level Parallelism and Different Genetic Architecture Underlying the Evolution of Body Shape in Lake Whitefish (Coregonus clupeaformis) Species Pairs

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The genetic differentiation at quantitative trait loci under local adaptation.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Ecologically meaningful transformations for ordination of species data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Symptoms and implications of selenium toxicity in fish: the Belews Lake case example

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Fast and accurate long-read alignment with Burrows-Wheeler transform

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Directional genetic selection by pulp mill effluent on multiple natural populations of three-spined stickleback (Gasterosteus aculeatus).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Evaluation of demographic history and neutral parameterization on the performance of FST outlier tests

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Effect of pollution on genetic diversity in the bay mussel Mytilus galloprovincialis and the acorn barnacle Balanus glandula.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The catadromous European eel Anguilla anguilla (L.) as a model for freshwater evolutionary ecotoxicology: relationship between heavy metal bioaccumulation, condition and genetic variability

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Anguilla anguilla L. Genotoxic responses after in situ exposure to freshwater wetland (Pateira de Fermentelos, Portugal).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Evolutionary toxicology: population-level effects of chronic contaminant exposure on the marsh frogs (Rana ridibunda) of Azerbaijan.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The hitch-hiking effect of a favourable gene

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Adaptive population divergence: markers, QTL and traits

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Polychlorinated biphenyls as hormonally active structural analogues

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Applications for next-generation sequencing in fish ecotoxicogenomics

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

genotype and genodive: two programs for the analysis of genetic diversity of asexual organisms

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Population genomics of rapid adaptation by soft selective sweeps.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

CEGMA: a pipeline to accurately annotate core genes in eukaryotic genomes

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

RAD sequencing highlights polygenic discrimination of habitat ecotypes in the panmictic American eel.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Phenotypic plasticity's impacts on diversification and speciation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

How cadmium could compromise the completion of the European eel's reproductive migration

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Transcriptional responses to environmental metal exposure in wild yellow perch (Perca flavescens) collected in lakes with differing environmental metal concentrations (Cd, Cu, Ni).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Effect of low-dose cadmium exposure on DNA methylation in the endangered European eel.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Surviving in a toxic world: transcriptomics and gene expression profiling in response to environmental pollution in the critically endangered European eel

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Detecting genome-wide gene transcription profiles associated with high pollution burden in the critically endangered European eel.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Contaminant driven genetic erosion and associated hypotheses on alleles loss, reduced population growth rate and increased susceptibility to future stressors: an essay

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Sublethal effects of exposure to chemical compounds: a cause for the decline in Atlantic eels?

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Transcriptional and physiological response of fathead minnows (Pimephales promelas) exposed to urban waters entering into wildlife protected areas

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Protective and antioxidant role of selenium on arsenic trioxide-induced oxidative stress and genotoxicity in the fish hepatoma cell line PLHC-1.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Tumor classification by tissue microarray profiling: random forest clustering applied to renal cell carcinoma

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Evolutionary change in human-altered environments

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

p,p'-Dichlorodiphenoxydichloroethylene induced apoptosis of Sertoli cells through oxidative stress-mediated p38 MAPK and mitochondrial pathway

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Toxicokinetic and Toxicodynamic Influences on Endocrine Disruption by Polychlorinated Biphenyls

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Signatures of positive selection: from selective sweeps at individual loci to subtle allele frequency changes in polygenic adaptation

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Transcriptomic responses to emamectin benzoate in Pacific and Atlantic Canada salmon lice Lepeophtheirus salmonis with differing levels of drug resistance

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Gene-environment interactions in heavy metal and pesticide carcinogenesis

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Identification of genes and haplotypes that predict rheumatoid arthritis using random forests.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

PBDE and PCB contamination of eels from the Gironde estuary: from glass eels to silver eels

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Endocrine and metabolic responses of Anguilla anguilla L. caged in a freshwater-wetland (Pateira de Fermentelos--Portugal).

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The consequences of phenotypic plasticity for ecological speciation.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Assessment of heavy metal contamination in various tissues of six ray species from İskenderun Bay, northeastern Mediterranean Sea.

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Human Domination of Earth's Ecosystems

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Genome Wide Association Study to predict severe asthma exacerbations in children using random forests classifiers

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Liver transcriptome analysis of Atlantic cod (Gadus morhua) exposed to PCB 153 indicates effects on cell cycle regulation and lipid metabolism

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

GoMiner: a resource for biological interpretation of genomic and proteomic data

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Correction for population stratification in random forest analysis

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Overview of random forest methodology and practical guidance with emphasis on computational biology and bioinformatics

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

The effect of metal pollution on the population genetic structure of brown trout (Salmo trutta L.) residing in the River Hayle, Cornwall, UK

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Genomic Selection in Wheat Breeding using Genotyping-by-Sequencing

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Eel fat stores are enough to reach the Sargasso

1 reference

https://api.crossref.org/works/10.1111%2FMEC.13466

21 January 2018

Identifiers

10.1111/MEC.13466

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

10 August 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q35839806&oldid=1862021997"