Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q35854178)
Watch
English
Toward a quantitative understanding of viral phylogeography
scientific article published on 28 October 2011
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
title
Toward a quantitative understanding of viral phylogeography
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
main subject
phylogeography
0 references
author
Andrew Rambaut
series ordinal
3
object named as
Andrew Rambaut
0 references
Philippe Lemey
series ordinal
4
object named as
Philippe Lemey
0 references
Nuno Rodrigues Faria
object named as
Nuno Rodrigues Faria
series ordinal
1
0 references
Marc A. Suchard
series ordinal
2
object named as
Marc A Suchard
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
publication date
28 October 2011
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
published in
Current opinion in virology
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
volume
1
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
issue
5
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
page(s)
423-429
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
cites work
SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Ancient hybridization and an Irish origin for the modern polar bear matriline
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Reconstructing the history of maize streak virus strain a dispersal to reveal diversification hot spots and its origin in southern Africa
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Spatial dynamics of human-origin H1 influenza A virus in North American swine
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Endemic dengue associated with the co-circulation of multiple viral lineages and localized density-dependent transmission
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Phylodynamics of the HIV-1 CRF02_AG clade in Cameroon
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Impact of CCR5delta32 host genetic background and disease progression on HIV-1 intrahost evolutionary processes: efficient hypothesis testing through hierarchical phylogenetic models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Phylodynamics and human-mediated dispersal of a zoonotic virus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Epidemiological and clinical consequences of within-host evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
HIV-1 phylogenetic analysis shows HIV-1 transits through the meninges to brain and peripheral tissues
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Three roads diverged? Routes to phylogeographic inference
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Host phylogeny constrains cross-species emergence and establishment of rabies virus in bats
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Phylogeography of recently emerged DENV-2 in southern Viet Nam
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Global migration dynamics underlie evolution and persistence of human influenza A (H3N2)
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Phylogeography takes a relaxed random walk in continuous space and time
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Reconstructing the initial global spread of a human influenza pandemic: A Bayesian spatial-temporal model for the global spread of H1N1pdm
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Distinct patterns of HIV-1 evolution within metastatic tissues in patients with non-Hodgkins lymphoma
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Discovering the phylodynamics of RNA viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Bayesian phylogeography finds its roots
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Evolutionary analysis of the dynamics of viral infectious disease
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
The origin and global emergence of adamantane resistant A/H3N2 influenza viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Learning to count: robust estimates for labeled distances between molecular sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Evolutionary history and phylogeography of human viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Cross-Species Virus Transmission and the Emergence of New Epidemic Diseases
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Molecular epidemiology of A/H3N2 and A/H1N1 influenza virus during a single epidemic season in the United States
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
A Likelihood Framework for Estimating Phylogeographic History on a Continuous Landscape
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
The global circulation of seasonal influenza A (H3N2) viruses
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Influenza A H5N1 immigration is filtered out at some international borders
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
BEAST: Bayesian evolutionary analysis by sampling trees
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Phylodynamics of HIV-1 in lymphoid and non-lymphoid tissues reveals a central role for the thymus in emergence of CXCR4-using quasispecies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Comparative study of methods for detecting sequence compartmentalization in human immunodeficiency virus type 1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
A statistical phylogeography of influenza A H5N1.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
The evolution of epidemic influenza.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Empirical evidence for the effect of airline travel on inter-regional influenza spread in the United States
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Relaxed phylogenetics and dating with confidence
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
The scaling laws of human travel
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Phylodynamic analysis of human immunodeficiency virus type 1 in distinct brain compartments provides a model for the neuropathogenesis of AIDS.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Semen-specific genetic characteristics of human immunodeficiency virus type 1 env.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Compartmentalization of human immunodeficiency virus type 1 between blood monocytes and CD4+ T cells during infection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Mapping the antigenic and genetic evolution of influenza virus
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
HIV-1 in genital tract and plasma of women: compartmentalization of viral sequences, coreceptor usage, and glycosylation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Hierarchical Phylogenetic Models for Analyzing Multipartite Sequence Data
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
MrBayes 3: Bayesian phylogenetic inference under mixed models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Bayesian selection of continuous-time Markov chain evolutionary models
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Inferring the historical patterns of biological evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Genetic diversity and tissue compartmentalization of the hepatitis C virus genome in blood mononuclear cells, liver, and serum from chronic hepatitis C patients
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
Human immunodeficiency virus type 1 populations in blood and semen
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
The molecular epidemiology of human immunodeficiency virus type 1 in Edinburgh
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
11 July 2018
The role of swine as "mixing vessel" for interspecies transmission of the influenza A subtype H1N1: a simultaneous Bayesian inference of phylogeny and ancestral hosts.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
24 September 2018
Fast, accurate and simulation-free stochastic mapping
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
24 September 2018
Counting labeled transitions in continuous-time Markov models of evolution.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
24 September 2018
Air travel and the spread of influenza: important caveats
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
24 September 2018
Synchrony, waves, and spatial hierarchies in the spread of influenza.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
24 September 2018
HIV-1 compartmentalization in diverse leukocyte populations during antiretroviral therapy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
24 September 2018
Adaptation of HIV-1 envelope gp120 to humoral immunity at a population level
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3312803
retrieved
14 November 2018
Identifiers
DOI
10.1016/J.COVIRO.2011.10.003
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
Fatcat ID
release_oxdnrwnyovh3nkcp75ypqhtet4
1 reference
stated in
Fatcat
reference URL
https://api.fatcat.wiki/v0/release/oxdnrwnyovh3nkcp75ypqhtet4
retrieved
24 November 2022
based on heuristic
mapped directly with Wikidata item
PMCID
3312803
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
PubMed ID
22440846
1 reference
stated in
Europe PubMed Central
PMCID
3312803
retrieved
10 August 2017
ResearchGate publication ID
221969677
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit