(Q35867641)

10 August 2017

Population genomics and phylogeography of an Australian dairy factory derived lytic bacteriophage (English)

1 reference

10 August 2017

0 references

1 reference

0 references

Eduardo Castro-Nallar

Eduardo Castro-Nallar

1

0 references

Ian B Powell

Ian B Powell

6

0 references

Torsten Seemann

Torsten Seemann

5

0 references

Keith A. Crandall

Keith A Crandall

8

0 references

author name string

Honglei Chen

2

1 reference

10 August 2017

Simon Gladman

3

1 reference

10 August 2017

Sean C Moore

4

1 reference

10 August 2017

Alan Hillier

7

1 reference

10 August 2017

P Scott Chandry

9

1 reference

10 August 2017

21 February 2012

1 reference

Genome Biology and Evolution

10 August 2017

1 reference

10 August 2017

4

1 reference

10 August 2017

3

1 reference

10 August 2017

382-393

1 reference

Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology

10 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Population dynamics of Neisseria gonorrhoeae in Shanghai, China: a comparative study

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Epidemic dynamics revealed in dengue evolution.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Bayesian phylogeography finds its roots

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Evolutionary analysis of the dynamics of viral infectious disease

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

DnaSP v5: a software for comprehensive analysis of DNA polymorphism data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Bayesian inference of population size history from multiple loci

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

jModelTest: phylogenetic model averaging

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Incorporating gaps as phylogenetic characters across eight DNA regions: ramifications for North American Psoraleeae (Leguminosae).

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

BEAST: Bayesian evolutionary analysis by sampling trees

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Genome sequence and global gene expression of Q54, a new phage species linking the 936 and c2 phage species of Lactococcus lactis

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Genome Annotation Transfer Utility (GATU): rapid annotation of viral genomes using a closely related reference genome

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Biodiversity and classification of lactococcal phages

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Relaxed phylogenetics and dating with confidence

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Lactococcal bacteriophage p2 receptor-binding protein structure suggests a common ancestor gene with bacterial and mammalian viruses

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Comparative genomics and evolution of the tailed-bacteriophages.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Phage abortive infection in lactococci: variations on a theme

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Llama antibodies against a lactococcal protein located at the tip of the phage tail prevent phage infection

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Population genetics of Neisseria gonorrhoeae in a high-prevalence community using a hypervariable outer membrane porB and 13 slowly evolving housekeeping genes

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Bayesian coalescent inference of past population dynamics from molecular sequences

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

MAFFT version 5: improvement in accuracy of multiple sequence alignment

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Milk contamination and resistance to processing conditions determine the fate of Lactococcus lactis bacteriophages in dairies

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Identification of the receptor-binding protein in 936-species lactococcal bacteriophages

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Phages and the evolution of bacterial pathogens: from genomic rearrangements to lysogenic conversion

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

11 July 2018

Bacteriophage genomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Sequence analysis of the lactococcal bacteriophage bIL170: insights into structural proteins and HNH endonucleases in dairy phages

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

A coalescent-based method for detecting and estimating recombination from gene sequences

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Two-locus sampling distributions and their application

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

Comparison of lactococcal bacteriophage isolated in the United States and Argentina.

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

On the number of segregating sites in genetical models without recombination

11 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3318435

A new look at the statistical model identification

11 July 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS017

A NEW MEASURE OF RANK CORRELATION

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS017

A genetic algorithm approach to detecting lineage-specific variation in selection pressure.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS017

Evolution of Lactococcus lactis phages within a cheese factory.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS017

Receptor-binding protein of Lactococcus lactis phages: identification and characterization of the saccharide receptor-binding site

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS017

The Evolutionary Genetics of Emerging Viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FGBE%2FEVS017

Microbiological and molecular impacts of AbiK on the lytic cycle of Lactococcus lactis phages of the 936 and P335 species

21 January 2018

1 reference

12 December 2020

Preventing Phage Lysis of Lactococcus Lactis in Cheese Production Using A Neutralizing Heavy-Chain Antibody Fragment from Llama

1 reference

12 December 2020

In search of molecular darwinism

1 reference

12 December 2020

Argentinean Lactococcus lactis bacteriophages: genetic characterization and adsorption studies

1 reference

12 December 2020

Analysis of the complete genome sequence of the lactococcal bacteriophage bIBB29

1 reference

12 December 2020

Identifiers

DOI

10.1093/GBE/EVS017

1 reference

10 August 2017

1 reference

10 August 2017

PubMed publication ID

22355195

1 reference